Lysinibacillus sp. OF-1: NV349_04960
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Entry
NV349_04960 CDS
T10748
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
lyo Lysinibacillus sp. OF-1
Brite
KEGG Orthology (KO) [BR:
lyo00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
NV349_04960 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lyo03019
]
NV349_04960 (rnc)
03009 Ribosome biogenesis [BR:
lyo03009
]
NV349_04960 (rnc)
03036 Chromosome and associated proteins [BR:
lyo03036
]
NV349_04960 (rnc)
Enzymes [BR:
lyo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
NV349_04960 (rnc)
Messenger RNA biogenesis [BR:
lyo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NV349_04960 (rnc)
Ribosome biogenesis [BR:
lyo03009
]
Eukaryotic type
90S particles
RNase
NV349_04960 (rnc)
Prokaryotic type
rRNA processing factors
NV349_04960 (rnc)
Chromosome and associated proteins [BR:
lyo03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
NV349_04960 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_2
HIT-like
DND1_DSRM
Phage_P2_GpU
NTP_transf_4
Motif
Other DBs
NCBI-ProteinID:
WCH49980
LinkDB
All DBs
Position
1067566..1068306
Genome browser
AA seq
246 aa
AA seq
DB search
MQKSGVLPEKVRNQFELLQHELNITFINKNLLYQAFTHSSYVNEHRRKLFTDNERLEFLG
DAVLELSVSKYLFEKYPNMSEGELTKLRASIVCEPSLVIFANELGFGRFVLLGKGEELTG
GRERPALLADVFESFVGALYLDQELQTVVSFLERIVFPKVEVGAFSHVMDFKSQLQEMVQ
QTNNGLLHYEIIDEKGPAHNRTFVSSVLLNGQELGIGRGKSKKEAEQQAAQCAMRMMREE
AAKEEA
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaatctggcgtacttcctgaaaaagtacgcaaccaattcgagctgttacagcat
gaattaaatatcacttttattaataaaaatttattgtatcaagcattcacgcattcatct
tatgtgaatgagcatcgccgtaagctatttacggataatgagcgtcttgaatttttagga
gacgcagtacttgaactatctgtttctaaatatctttttgagaaatacccaaatatgagc
gagggtgagttaacaaagttaagagcttctatcgtttgtgagccatcactagttattttt
gcgaatgaattaggctttggacgcttcgtgttacttggaaaaggtgaggaattaacaggt
ggtcgggaacgcccagcgctacttgcggatgtgtttgaatcatttgtaggtgcactctat
ctagatcaagaattacaaacggtcgtgtcgtttttagagcgtatcgtgttcccaaaagta
gaagtaggtgctttttcgcatgtgatggattttaaaagtcaattgcaagaaatggtacaa
caaactaataatggacttcttcattacgaaataatcgatgaaaaaggcccagcacataac
cgtacctttgtatcaagcgtattattgaacgggcaagagcttggtattggtcgtggaaaa
tcaaaaaaagaagccgagcagcaagctgcacaatgtgcaatgcgaatgatgcgtgaagaa
gctgcaaaagaggaggcttaa
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