Lysinibacillus sp. OF-1: NV349_10835
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Entry
NV349_10835 CDS
T10748
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lyo Lysinibacillus sp. OF-1
Pathway
lyo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lyo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NV349_10835 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lyo03019
]
NV349_10835 (recQ)
03400 DNA repair and recombination proteins [BR:
lyo03400
]
NV349_10835 (recQ)
Enzymes [BR:
lyo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NV349_10835 (recQ)
Messenger RNA biogenesis [BR:
lyo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NV349_10835 (recQ)
DNA repair and recombination proteins [BR:
lyo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NV349_10835 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Cas3-like_C_2
T7SS_ESX_EspC
Motif
Other DBs
NCBI-ProteinID:
WCH49838
LinkDB
All DBs
Position
2232257..2234029
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AA seq
590 aa
AA seq
DB search
MEQARQMLQHHFGYEAFRQGQAQIIEQTLRGQSSLCVMPTGGGKSICYQIPALMLDGLTI
VISPLISLMQDQVEALRAANIPAAYINSTLSAQEVDETMQLASAGYLKLLYIAPERLESV
SFLQALSYLPVPLIAVDEAHCISQWGHDFRPSYRSIQKLFTLWSQKPTVLALTATATPAV
CDDIRQLLTIDEQATVMTGFSRENLALSVLIGENKERYVKNYVQQNKQEVGIIYAATRKA
VDAIYDMLSRSGEAVAKYHAGLSEDLRIAEQERFLKDEARIMVATNAFGMGIDKSNVRFV
LHYQMPRNMESYYQEAGRAGRDGLPSACILLYASGDVQTQRFLIEQTQDEARIAQELAKL
QTMVDYCHTEGCLQNAILSYFAEEPEEPCGRCSNCNDGRAVTDVTEDAQKVLACVVRMGQ
KFGKTMVAQVLIGSKNQKITEFGFARLSTYGILKGKYASKDVSNFIEFLIAEGLLAVKHG
TFPTIYVSANGKEVLLGNRQVMRKEAVAVKKLVDNDPLFEHLRVLRKDIADEEKVPPFVV
FSDKTLRDLCDKKPAVLEDLRQVSGIGEVKFDKYGKRFFDALQSFLEASV
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggagcaagcaagacaaatgctacagcatcattttggctatgaagcctttcgccaagga
caagcccaaattatagaacaaacattacgagggcagtcgagcctgtgtgtcatgccaact
ggtggcgggaaatccatttgctatcaaattcctgcattaatgctagatgggttaactatt
gtcatttccccccttatatctctgatgcaagatcaggtggaggctttacgtgcggcgaac
attcctgccgcctatattaacagtacgttgtcggcacaggaagtagatgaaacgatgcaa
ctagcgagcgcaggttatttaaaacttctctatattgcgcctgagcgattggaaagtgta
tcctttctgcaagcactatcctatttacctgtgccgttaatagcggtagatgaggcacac
tgtatctcgcaatgggggcatgactttagaccaagctatcgctccattcaaaagctgttt
acactatggtcacaaaagcccacggttttagcgctgacagccactgcgacaccagctgtc
tgtgatgatatccgccaattactaacaattgatgagcaagcgacagtcatgacaggcttt
tcacgtgaaaatttggcgctgtccgtactaattggtgaaaataaagaacgttatgtaaaa
aattatgtacaacaaaataaacaggaagtcggcattatttacgcggccactcgaaaagca
gtagacgcgatttatgacatgctgagtcgctctggtgaagcggttgcgaaatatcatgcg
ggtctgtcagaggacttgcgaatagctgagcaggagcggtttttaaaagatgaagcacgt
attatggtagcaacgaatgcttttggtatggggattgataaaagtaatgtgcgctttgtg
ttgcattatcaaatgcctcgtaatatggagagttattaccaagaagcgggtcgtgcagga
cgtgatggtctgccgagtgcctgtattttattatatgcttctggggacgtccaaacacag
cgttttctaattgaacaaacacaggatgaagcacgtatagcccaagaattagccaagctc
caaacgatggtcgattattgccatacagagggctgcttacaaaatgcgattttatcctat
tttgctgaagagccagaggagccttgtgggcgttgtagtaattgcaatgatgggcgagca
gtgacagacgtgactgaggatgcacaaaaggtgttagcctgtgtggtacgcatgggacaa
aaattcggcaagaccatggtggctcaggtgttgattggctccaaaaatcaaaaaataacg
gaatttggctttgcacgtttatcgacctatggcatcttaaaaggaaaatatgcctcaaag
gatgtttcgaactttattgaatttttaattgcggaaggtttacttgctgtgaagcatggg
acattcccaaccatatatgtatcagcgaatggcaaggaagtactgcttggcaatcgacag
gttatgcgcaaggaagctgtagcagtgaagaagctggtggacaacgatcctttattcgaa
catttacgcgtattgcgcaaagatattgcagatgaagaaaaggtgccaccatttgtagtg
ttctctgacaaaacattgcgtgatttatgtgataagaagccagccgtactggaggattta
cgacaggtgagcggtattggtgaggtgaaatttgacaagtacggtaagcgattctttgac
gcattacaatcgtttttagaagcttccgtgtaa
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