Lysinibacillus sp. OF-1: NV349_11055
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Entry
NV349_11055 CDS
T10748
Name
(GenBank) Lsa family ABC-F type ribosomal protection protein
KO
K19350
lincosamide and streptogramin A transport system ATP-binding/permease protein
Organism
lyo Lysinibacillus sp. OF-1
Pathway
lyo02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lyo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NV349_11055
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lyo02000
]
NV349_11055
01504 Antimicrobial resistance genes [BR:
lyo01504
]
NV349_11055
Transporters [BR:
lyo02000
]
ABC transporters, eukaryotic type
Other subfamilies
Macrolide exporter
NV349_11055
Antimicrobial resistance genes [BR:
lyo01504
]
Gene variants
Macrolide resistance genes
Transporters
NV349_11055
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
KAP_NTPase
Dynamin_N
AAA_29
RsgA_GTPase
MMR_HSR1
AAA_15
AAA_23
ABC_tran_Xtn
MobB
Motif
Other DBs
NCBI-ProteinID:
WCH49881
LinkDB
All DBs
Position
complement(2279783..2281264)
Genome browser
AA seq
493 aa
AA seq
DB search
MSMIQVQDLTFSYPSSFDYIFEGVNFQIDTDWKLGFIGRNGRGKTTFFNLLLGNYEYSGN
IISSVEFTYFPYPVSDPNKYTYEIFEEICPLAEDWEYIREIAYLDVDAEVMYRPFQTLSN
GEQTKVLLAALFLTEGQFLLIDEPTNHLDTDARKTISNYLRKKKGFILISHDRAFLDGCV
DHILSINRANIDVQSGNYSTWKLNFDRQQEHEEATNQRLQKDIDRLTQSSKRSVGWSNQV
EASKNGTTNSGSKLDKGFVGHKAAKMMKRAKNLESRQQKAIHEKSKLLKNVEKTESLKVQ
PLAFPSKDMVVVTDVSIQYDDNFVNQPISFKVAQGDRIVLDGKNGSGKSSILQLLLGKPI
QHTGSIHLAAGLIISYVQQDTAHLKGALSDFIEEHAIDETLFKSILRKMDFERIQFDKDI
SHYSGGQKKKLLIAKSLCEKAHLYIWDEPLNFIDIYSRMQIEELIQSFNPTMIFVEHDQA
FQQTVATKTIALS
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatgatacaagtacaagacttaacgttttcttacccaagcagctttgattatatt
tttgagggtgtcaactttcagattgatacagattggaaacttggatttatcggtaggaat
ggtcgtgggaagacaacattttttaatttgctattagggaattatgagtatagtgggaac
atcatttcttcagtagaatttacttatttcccctatcctgtttcagacccaaataaatat
acgtacgaaatttttgaagaaatttgccctctggcagaagattgggaatatattcgtgaa
atagcctatctagatgtcgatgctgaggtcatgtatcgcccttttcaaacattatctaat
ggagagcaaacaaaggtgttgcttgcagcgctctttttaacagagggacagtttctatta
attgatgagccaaccaatcatctcgatacagatgcacgaaagacgatctctaattatcta
cgcaagaaaaaaggatttattttaatttcgcatgacagagcctttttagatggctgtgtt
gatcatattttatcgatcaatagagccaatattgatgttcaaagtggtaactactcaact
tggaagttaaattttgatcgacagcaggaacatgaagaagcaactaatcaacgtctgcaa
aaagatatcgaccgtttaacgcagtcttccaagcgttcggtaggttggtctaatcaagtg
gaggcttccaaaaatggaactacgaattcgggttctaagctagataaaggctttgttgga
cataaagcagccaagatgatgaagcgagcaaagaacttggaatctaggcagcaaaaagcg
attcatgaaaaatcaaaactgctaaaaaatgttgaaaaaacggaatctttaaaagtacaa
ccattagcatttccatcaaaagacatggttgttgtaacggatgtatcaattcagtatgac
gacaactttgtgaatcagcctattagcttcaaagtggcgcaaggtgatcgcattgttctc
gatggcaaaaatggaagcggaaaaagtagtatcctacagctgcttcttggcaagcctata
cagcatacaggctctatacatttagctgctggccttattatctcctatgttcaacaggat
actgctcatttgaagggagcattatcggattttattgaagagcatgctatagatgagacg
ttatttaaatctattctgcgaaagatggactttgagcggattcaatttgataaagacatc
tcacattattcaggtgggcaaaagaaaaagctgttgattgccaaaagtttgtgtgaaaaa
gcacatctctatatttgggatgaacccttaaattttattgatatttattcgcgcatgcag
attgaagagcttattcaaagttttaatcctacaatgatttttgtggagcatgaccaagcc
tttcaacaaaccgtggcaacgaaaacaatagctttgtcataa
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