KEGG   Lysinibacillus sp. OF-1: NV349_11940
Entry
NV349_11940       CDS       T10748                                 
Name
(GenBank) hypothetical protein
  KO
K24072  positive control factor
Organism
lyo  Lysinibacillus sp. OF-1
Brite
KEGG Orthology (KO) [BR:lyo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lyo03021]
    NV349_11940
Transcription machinery [BR:lyo03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     NV349_11940
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r4 HTH_Tnp_ISL3 HTH_23 HTH_29 HTH_17 DUF6362 HTH_10 PhyR_sigma-like TrmB HTH_24 Terminase_5 Xre-like-HTH HTH_38 HTH_28 HTH_psq FerB MarR_2 DUF134 HU-CCDC81_euk_2 HTH_11 HTH_50 Phage_NinH Elf4 HTH_36 MerR_1 DnaB_2 GerE KORA HTH_1
Other DBs
NCBI-ProteinID: WCH45818
LinkDB
Position
complement(2455730..2456239)
AA seq 169 aa
MYFPDLINEYKQTLKDLKVAGGCLSMVKDMQEAIKWMETGYDPAEYRAATRTDVYVMDHH
LMQDLITYVDSVKMTPDVLAEVIDYSYDNSAVKEIERMFNVKDTANQAMAGLTENERTAF
IMIRAEHMTFSKVAKILGVNRGTVQNYVKRAESKIQNNISKDKLFLYAV
NT seq 510 nt   +upstreamnt  +downstreamnt
atgtactttccagatttaattaatgaatataaacaaactcttaaagatttaaaggtagca
ggtggatgtctaagtatggtgaaagatatgcaagaagctattaagtggatggaaacaggc
tatgatccagcagaatatagagccgctacacgtacagatgtttatgttatggaccatcac
ttaatgcaagaccttattacgtatgttgacagtgtgaaaatgacccctgatgtgcttgca
gaggtaattgactatagttatgacaattctgcggttaaagaaattgaaagaatgtttaat
gttaaagatacggctaatcaagctatggccggtttaacggaaaatgaacgtactgctttt
ataatgatacgagccgagcatatgacttttagtaaggttgctaaaatactaggtgttaat
cgtggtaccgtacaaaattatgtaaagcgagcagaatccaaaattcaaaataacattagt
aaagacaaactttttttatatgctgtataa

DBGET integrated database retrieval system