Lysinibacillus sp. OF-1: NV349_11940
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Entry
NV349_11940 CDS
T10748
Name
(GenBank) hypothetical protein
KO
K24072
positive control factor
Organism
lyo Lysinibacillus sp. OF-1
Brite
KEGG Orthology (KO) [BR:
lyo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lyo03021
]
NV349_11940
Transcription machinery [BR:
lyo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NV349_11940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
HTH_Tnp_ISL3
HTH_23
HTH_29
HTH_17
DUF6362
HTH_10
PhyR_sigma-like
TrmB
HTH_24
Terminase_5
Xre-like-HTH
HTH_38
HTH_28
HTH_psq
FerB
MarR_2
DUF134
HU-CCDC81_euk_2
HTH_11
HTH_50
Phage_NinH
Elf4
HTH_36
MerR_1
DnaB_2
GerE
KORA
HTH_1
Motif
Other DBs
NCBI-ProteinID:
WCH45818
LinkDB
All DBs
Position
complement(2455730..2456239)
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AA seq
169 aa
AA seq
DB search
MYFPDLINEYKQTLKDLKVAGGCLSMVKDMQEAIKWMETGYDPAEYRAATRTDVYVMDHH
LMQDLITYVDSVKMTPDVLAEVIDYSYDNSAVKEIERMFNVKDTANQAMAGLTENERTAF
IMIRAEHMTFSKVAKILGVNRGTVQNYVKRAESKIQNNISKDKLFLYAV
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atgtactttccagatttaattaatgaatataaacaaactcttaaagatttaaaggtagca
ggtggatgtctaagtatggtgaaagatatgcaagaagctattaagtggatggaaacaggc
tatgatccagcagaatatagagccgctacacgtacagatgtttatgttatggaccatcac
ttaatgcaagaccttattacgtatgttgacagtgtgaaaatgacccctgatgtgcttgca
gaggtaattgactatagttatgacaattctgcggttaaagaaattgaaagaatgtttaat
gttaaagatacggctaatcaagctatggccggtttaacggaaaatgaacgtactgctttt
ataatgatacgagccgagcatatgacttttagtaaggttgctaaaatactaggtgttaat
cgtggtaccgtacaaaattatgtaaagcgagcagaatccaaaattcaaaataacattagt
aaagacaaactttttttatatgctgtataa
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integrated database retrieval system