Lysinibacillus sp. OF-1: NV349_16925
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Entry
NV349_16925 CDS
T10748
Symbol
icd
Name
(GenBank) NADP-dependent isocitrate dehydrogenase
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
lyo Lysinibacillus sp. OF-1
Pathway
lyo00020
Citrate cycle (TCA cycle)
lyo00480
Glutathione metabolism
lyo00720
Other carbon fixation pathways
lyo01100
Metabolic pathways
lyo01110
Biosynthesis of secondary metabolites
lyo01120
Microbial metabolism in diverse environments
lyo01200
Carbon metabolism
lyo01210
2-Oxocarboxylic acid metabolism
lyo01230
Biosynthesis of amino acids
lyo04146
Peroxisome
Module
lyo_M00009
Citrate cycle (TCA cycle, Krebs cycle)
lyo_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
lyo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
NV349_16925 (icd)
09102 Energy metabolism
00720 Other carbon fixation pathways
NV349_16925 (icd)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
NV349_16925 (icd)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
NV349_16925 (icd)
Enzymes [BR:
lyo01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
NV349_16925 (icd)
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GFIT
Motif
Pfam:
Iso_dh
Motif
Other DBs
NCBI-ProteinID:
WCH46758
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Position
complement(3461130..3462392)
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AA seq
420 aa
AA seq
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MSNKIVVENGVLNVPNNPVIPFIEGDGIGPDIWAAASRVIDAAVEKAYNGEKKIEWLEVL
AGEKAFNQTGEWLPQETLDKINEYLIAIKGPLTTPIGGGIRSLNVALRQQLDLYVCLRPV
RHFDGVPSPVKRPEDVDMVIFRENTEDIYAGIEFESGSEQAQKIINFLQTEFGVNQIRFP
ETSGIGVKPVSKEGTERLVRSAIEYAIKHKRPSVTLVHKGNIMKFTEGGFKKWGYELAEK
EFADQTFTWNQYDAIKAEQGEEAANKAQADALAAGKILVKDSIADIFLQQILTRPTEFDV
VATMNLNGDYISDALAAQVGGIGIAPGANINYVTGHAIFEATHGTAPKYAGQDKVNPSSV
LLSGVLMLEHLGWQEAADMITKSVEKTISSKVVTYDFARLMDGATEVKCSEFANELIKNL
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaacaaaattgtagttgaaaatggcgtacttaatgtaccaaataatccagtaatt
cctttcatcgaaggtgatggaattggtccagatatctgggcagcagcatcacgcgtaatc
gacgcagctgtagaaaaagcttataacggtgaaaagaaaatcgaatggttagaagtttta
gctggtgaaaaagcatttaaccaaactggtgaatggttaccacaagaaactttagacaaa
attaacgaatacttaattgcaatcaaaggtcctcttactacaccaatcggtggtggtatc
cgctctctaaacgtagcattacgtcaacaacttgacttatatgtatgcttacgtccagta
cgtcactttgatggagtgccttctccagttaaacgcccagaagacgttgacatggttatc
ttccgcgaaaacacagaagacatctatgctggtattgaattcgaatctggctctgaacaa
gctcaaaaaatcatcaacttcctacaaactgaatttggtgtaaaccaaatccgtttccca
gaaacttctggtattggtgtaaaacctgtatctaaagaaggtactgagcgtttagtacgt
tctgctatcgaatatgcaattaaacataaacgcccatctgttactttagttcataaaggt
aacatcatgaaattcactgaaggtggattcaaaaaatggggttatgaattagctgaaaaa
gaatttgctgatcaaacattcacttggaatcaatatgatgcaatcaaagctgaacaaggt
gaagaagcagcaaacaaagcgcaagctgacgctttagcagctggtaaaatcttagtgaaa
gattctatcgctgatatcttcttacaacaaattttaactcgtccaactgagttcgatgta
gtagctacaatgaacttaaacggtgactatatttctgatgctctagctgcacaagttggt
ggtatcggtatcgctccaggcgcgaacatcaactatgtaactggacatgcaatcttcgaa
gctactcacggcacagctccaaaatatgctggccaagataaagtaaacccatcatcagtt
ttactttcaggtgtattaatgcttgaacacttaggatggcaagaagctgctgacatgatc
actaaatctgttgagaaaacaatttcttctaaagttgtaacttatgacttcgcacgttta
atggacggcgctacagaagtgaaatgttcagaattcgcgaacgagttaatcaaaaaccta
taa
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