Lysinibacillus sp. OF-1: NV349_19125
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Entry
NV349_19125 CDS
T10748
Symbol
yhaM
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
lyo Lysinibacillus sp. OF-1
Brite
KEGG Orthology (KO) [BR:
lyo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lyo03019
]
NV349_19125 (yhaM)
Messenger RNA biogenesis [BR:
lyo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NV349_19125 (yhaM)
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Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Motif
Other DBs
NCBI-ProteinID:
WCH47129
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All DBs
Position
complement(3906341..3907276)
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AA seq
311 aa
AA seq
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MKGITTLQVGEAVDQFLLIKQATKGVTTVGKPFMSLLLQDKSGDIEAKLWDTNEDHEKMY
HAEAIVRVGGEIHDYRGKNQLRIKSIRVAKPEEGIAIDDLVPSSATPKEQLYEELTQFFF
DIKNPNISRITRAAIKKHYDAILVFPAATKNHHDYASGLLDHMVSMLKLGKAIADLYPTL
NRDLLYAGIILHDIGKVVELSGPVATMYTVEGNLLGHITIMVNEIAKIASELEIEGEEVM
LLQHMVLSHHGKEEWGSPKKPMLQEAEILHYIDNIDAKMNMLTRALGKTTPGEFTERLFP
LDNRSFYKPSI
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgaaagggattacgacgctccaagttggagaagcagttgatcaatttttattaataaaa
caagcgacaaaaggtgttacaaccgttggaaagccatttatgtcgctattactacaagat
aaaagtggagatattgaggcaaagctctgggatacaaatgaggatcatgaaaaaatgtat
catgctgaggccattgtacgtgtaggtggagagattcacgactatagaggaaagaatcaa
ttgcgtatcaaatctattcgtgttgccaagccagaggaaggtattgcgatcgatgattta
gtaccatcctctgcaacaccaaaagaacaattgtatgaagaattgacacaatttttcttt
gatattaaaaatccaaatatctcacgtattacaagagcggctattaaaaaacattatgat
gccatcttagtttttccggcagcaactaaaaaccatcatgactatgcgtctggtttatta
gatcatatggtgtccatgctcaaactaggaaaagccattgctgatttatatccaacactt
aatcgtgacctgttatatgcaggcattattttgcatgatattggcaaggttgtggagttg
tctgggcctgttgccacgatgtatacagtggagggcaatttattaggtcacattaccatt
atggtgaatgaaattgccaaaattgcaagtgagctagaaattgaaggcgaagaagtcatg
ctgttgcagcatatggtattgtctcaccatgggaaagaagagtgggggagtccgaaaaaa
ccgatgcttcaagaagcggaaatcttacattatattgataatatagacgcgaagatgaac
atgctaacaagagcattagggaaaacgacaccaggtgaatttactgagcggcttttccca
cttgataatcgttcattctataagccttctatttaa
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