Lysinibacillus sp. OF-1: NV349_20070
Help
Entry
NV349_20070 CDS
T10748
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lyo Lysinibacillus sp. OF-1
Pathway
lyo03420
Nucleotide excision repair
lyo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lyo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NV349_20070 (pcrA)
03430 Mismatch repair
NV349_20070 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lyo03400
]
NV349_20070 (pcrA)
Enzymes [BR:
lyo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NV349_20070 (pcrA)
DNA repair and recombination proteins [BR:
lyo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NV349_20070 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
NV349_20070 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
AAA_11
ResIII
Urocanase_N
DUF3842
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WCH47290
LinkDB
All DBs
Position
complement(4088018..4090270)
Genome browser
AA seq
750 aa
AA seq
DB search
MEQLTKNLLAGMNPEQERAVKTTDGPLLIMAGAGSGKTRVLTHRIAYLVIEKEVYPSKIL
AITFTNKAAREMRERIDGVLGNGTGDSMWVSTFHSMCVRILRRNIDQLGISRNFSILDST
DQLSVIKNVMKDENIDPKRFEPRAILNAISAAKNECITADDYAGQMNDKNPYEQTVARVY
KGYEKRLRRNQSLDFDDLIMTTITLFKRVPEVLEYYQNKFQYIHVDEYQDTNKSQYLLVQ
LLAKKFKNICVVGDSDQSIYRWRGADIGNILSFEKDYPNAKVIMLEQNYRSTKRILQAAN
DVIQNNTTRYPKELRTENAEGEKIALYKAYNEQEEAQFVVQTIQQLIEKENRSFDDFAIL
YRTNAQSRVMEEVLVKSNMAYQIVGGTKFYDRKEIKDLLAYLRLIANNDDDLSLARIINE
PKRSIGATSFEKMARYAIDQDRSIFDAMNDLVFMGLTGKAANSAEQFYAMIKDFTEMQDY
LSVTEIVEQVIDKSGYRTMLQNEKTIEAESRLENIEEFLSVTKAFEERSDDKSLIAFLTD
LALIADIDALDKEDASKGNIILMTMHAAKGLEFPIVFIIGMEENIFPHSRSLDDQDEMEE
ERRLMYVGVTRAEERLYLTCAQSRTIFGRSSFNNASRFLGEISEDITESISKAGAESKLP
FATNNRSTAGYQKRTLGAIQQTQPATARLQATGGDQFGWKAGDKAIHKKWGTGMVVSVKG
EGDSTELDIAFPQPIGIKRLLAQFAPIEKA
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atggaacagttaacaaaaaatttactagcaggaatgaatcctgaacaggaaagagcggtc
aaaacaactgatggaccgttacttattatggcaggtgctgggtcaggaaaaacacgtgtt
ttaacacatcgtattgcttatttagtgatcgaaaaggaagtatatccatcaaagattttg
gcgattacgtttacgaataaagcagcacgagaaatgcgcgagcgtattgatggcgttcta
gggaatggtaccggcgatagtatgtgggtttctactttccactcaatgtgtgtaagaatt
ttacgtcgtaatatcgatcaactaggcatatctcgtaatttctccattttagattccact
gatcagctatcagtcatcaaaaatgtgatgaaggatgagaatattgaccctaaacgtttt
gagccgagagcgattttaaatgcgattagtgcagcgaaaaatgaatgtattactgctgac
gattacgctggacaaatgaacgataaaaacccttatgaacaaaccgttgcacgtgtctat
aaaggctatgaaaaaagactacgtcgcaatcaatcgctcgattttgatgatttgattatg
acgacgattacattgtttaaacgtgtgcctgaagtgctcgaatactatcaaaataaattt
caatatattcatgtagatgagtaccaagatacgaataaatctcaatatttacttgtacag
ttactggcaaagaaatttaaaaatatttgtgttgtaggggactccgatcagtccatctat
cgatggcgtggtgctgacattggcaatatcctatcttttgaaaaggattatcctaacgcc
aaggtcataatgcttgagcagaattatcgttctactaaacgcatcctacaggcggcaaat
gacgtcattcaaaataatacaacacgttacccaaaagaactgcgcacagaaaatgcagag
ggtgaaaaaattgccttatataaagcttataatgagcaagaggaagcgcaatttgttgta
caaacgattcagcaattaattgaaaaagaaaatcgttcatttgatgactttgctatttta
tatcgtacgaatgctcaatcacgtgtgatggaggaagtacttgttaaatccaatatggcc
tatcaaatagtgggcggaacaaagttctatgatcgaaaagagattaaagacttactagct
tatttacgactgattgccaataatgatgatgatttatcactggcacgtattattaatgag
ccgaagcgtagtattggagctacatcctttgaaaaaatggcacgctatgcgattgatcag
gatcgttccatttttgatgcgatgaatgatcttgtattcatgggtctaactgggaaagca
gcaaattcagctgagcaattttatgcaatgattaaagactttacagagatgcaggattat
ttatctgttactgaaattgtggagcaagtcatcgataaatcaggctaccgtacaatgctg
caaaatgaaaaaacaattgaagcagaaagtcgtctagagaatattgaagagtttttatct
gtcacaaaggcttttgaggagcgcagtgatgataaaagcttaattgcttttttaacagat
ttagctcttattgctgatattgatgcactagataaagaagatgcttctaagggcaatatt
attttaatgacgatgcatgccgctaaaggcttagaattccctattgtctttattatcggt
atggaggaaaatatattcccacattcacgctctttagacgatcaagatgagatggaagag
gaacgccgtcttatgtatgttggcgtgacacgagctgaggaacgtctctatttaacatgt
gcacaaagccgaacaatttttggtcgttcaagctttaataacgcctcccgattcttaggt
gaaatttcagaagacattacagagtccatttctaaggcaggtgcagaatcaaagctaccg
tttgccactaataatcgttcaacagctggctatcaaaagcgcacgcttggtgctattcaa
caaacacagcctgctacagctcgtttacaagcaacgggtggagatcaatttggctggaag
gctggagataaggcgattcataaaaaatggggaacgggtatggtagtcagtgtaaaaggt
gaaggtgatagtacagagcttgatatcgcctttccacaaccaattggcataaaacgatta
ctagctcaatttgcaccgattgaaaaagcgtaa
DBGET
integrated database retrieval system
