Lysinibacillus sp. OF-1: NV349_22680
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Entry
NV349_22680 CDS
T10748
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lyo Lysinibacillus sp. OF-1
Pathway
lyo03420
Nucleotide excision repair
lyo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lyo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NV349_22680
03430 Mismatch repair
NV349_22680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lyo03400
]
NV349_22680
Enzymes [BR:
lyo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NV349_22680
DNA repair and recombination proteins [BR:
lyo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NV349_22680
MMR (mismatch excision repair)
Other MMR factors
NV349_22680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
Viral_helicase1
UvrD_C
SLFN-g3_helicase
UvrD_C_2
AAA_30
PhoH
DEAD
ResIII
AAA_16
NACHT
Motif
Other DBs
NCBI-ProteinID:
WCH47753
LinkDB
All DBs
Position
4605302..4607605
Genome browser
AA seq
767 aa
AA seq
DB search
MENQNDWLEEKHHLEQSLNLIDHKKNELLLKEKSFKENAVALKKTFWNDVRVNLDTAEDV
DETFFAIKQQVELLSDSELAQQRAIQNVKVYERLQQSPYFARIDFLQDGQQDPLKIYIGV
ATLLDEQDENIVIYDWRAPISSMYYDCTPGKASYDTTAEEIHGEMLLKRQFIIKNGQLQS
MFNTGLTIGDDLLLAILAQNANEHIRSIVATIQAEQNKIIRHVQSRYLIVEGVAGSGKTA
VALQRVAYLLYRYRNEMTADQILLITPNQLFNQYVHTVLPDLGEDNMQQLTFIEYVEKRL
GRQFKLEYPYEQLEGLLTEKDEAHYRTKLSSISYKASLAYKHLMDQYVSYLSNKGLLFKN
IVFRGERIITAQEITEYFYSFPSTMSIPNRLQFVKEWLLQQLTKFEKAERTKEWVEEATE
LLDKEDYSKSYSELLYEGRYTENSFDDLDQERQKLARQIVKKYFKPLRNSVHQLKFVHML
GTYRQLFDLNNPITKDLQHLMPNDWEDICQQTLPNLAERFIAYEDAAPFLYLQDKIEGQQ
TNTMIHHVLIDEAQDYSPFQLTVLQQLFPKARMTILGDGHQTIHPHTFDNPSLLDPQLYG
EQAEKMILTKSYRSTKQIIQLTAKILNDGSEVEAFNRTGPEPSITVVPNELELIDEITQN
IHHLSAKFETIAVICKTAAECSAVYGQLSNQVDIQLINHNTKQFKKGILLLPAYMAKGIE
FDAVLIYNACAANYAKENERYYFYTACTRAMHELHIYSINKLTHFLQ
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
ttggaaaatcaaaatgactggctagaagaaaaacatcatcttgagcaaagtttaaacctc
attgatcacaaaaagaacgaattattgctaaaagaaaagagcttcaaggaaaatgctgtc
gctctgaagaaaactttttggaacgatgtcagagtcaatttagacactgctgaagatgtt
gacgaaacctttttcgcgattaagcaacaggtagagcttctctctgactcagagcttgca
cagcagcgtgcaattcagaatgtaaaggtatacgaacgtttacaacagtcaccctatttt
gctcgtattgactttttacaagatgggcagcaagatccattaaaaatttatataggtgtt
gccactttattggacgaacaagatgaaaatatagttatttatgattggcgtgcacctata
tcaagtatgtactatgattgcacaccaggtaaagcctcctacgacacaacagcagaagag
attcatggtgaaatgctactgaaacggcaatttattattaaaaacgggcagctacaatcg
atgtttaatactggtcttaccattggggatgatttattgcttgctatccttgcacaaaat
gcaaacgagcatattcgtagtatcgttgcaacgattcaagctgagcaaaataaaattatt
cgccatgttcaatcacgctatcttattgtagagggtgttgcgggtagtggtaaaacagct
gtggctttacaacgagtcgcttatctattgtatcgctatcgcaatgaaatgacggccgat
caaattttactgattacacctaatcaactttttaaccaatatgtccatacggtcttacct
gatttaggcgaggacaatatgcagcaattaacgtttatagagtatgtagaaaaacgatta
ggtcgacagtttaaattggaatatccgtacgagcaattagagggccttttaacagaaaag
gatgaagctcattatcgaacaaaattaagtagtatatcttataaagcgagccttgcttac
aagcatttgatggatcaatatgtaagctatttatccaataagggcttattatttaaaaat
atcgtatttcgtggggaacgaattattacagcacaggaaattactgaatacttctattct
ttcccttccactatgtcgataccaaatcgcctacaattcgtaaaagaatggttattgcag
caactgacgaaatttgaaaaggctgagcgtacaaaagaatgggtagaagaagcgactgaa
ctattagataaagaggactactccaagtcttacagtgagcttttatacgaagggcgctat
actgaaaattcattcgatgatttagatcaagaacgacaaaaattagcgagacaaattgtt
aaaaaatactttaaaccgttacgcaattccgttcaccaattaaagtttgtgcatatgtta
ggtacgtatcgccaactctttgatttgaataatcccattactaaagatttacagcatctt
atgccaaacgattgggaggatatttgccagcagacacttccaaatttagcagaacgcttt
atagcttatgaggatgcagcaccatttttatatttacaggacaaaattgaagggcagcag
actaatacgatgatccatcatgtattgattgatgaagcgcaagattattctccattccaa
ctaactgtattacagcagttattcccaaaagcacgtatgactattttaggagatggacat
caaacgattcatccacataccttcgataacccttccctgctcgaccctcaattatatggt
gagcaggctgaaaaaatgattttaacgaaaagttatcgttcgacaaaacaaatcattcaa
cttactgcaaaaattttaaatgatggtagcgaagttgaggcatttaaccgaactggtcca
gaaccatcaattactgtcgttcctaatgaattggaactgatagatgaaattacccaaaac
atccatcacctctctgctaaatttgaaaccattgctgtcatttgtaaaactgctgctgaa
tgctccgcagtatatgggcaattaagtaatcaagtagatattcaattgattaaccataat
acgaagcagtttaaaaagggtattttattacttccagcttatatggcgaaaggtatcgaa
tttgatgctgtgcttatttataatgcatgtgctgctaattacgcaaaggaaaacgaacgg
tactatttttatacagcctgcacgagggctatgcatgagctacacatttattccatcaac
aaattaacgcatttccttcaatga
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integrated database retrieval system
