Lysinibacillus sp. PLM2: MTP04_01350
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Entry
MTP04_01350 CDS
T09546
Symbol
hno
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
lyp
Lysinibacillus sp. PLM2
Pathway
lyp02020
Two-component system
lyp02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
lyp00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
MTP04_01350 (hno)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
MTP04_01350 (hno)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lyp03021
]
MTP04_01350 (hno)
Transcription machinery [BR:
lyp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MTP04_01350 (hno)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_Tnp_ISL3
Sigma70_r4
Arg_repressor
HTH_23
LacI
Fe_dep_repress
Sigma70_r4_2
HTH_IclR
HTH_21
PAC2
Motif
Other DBs
NCBI-ProteinID:
BDH60005
LinkDB
All DBs
Position
164923..166260
Genome browser
AA seq
445 aa
AA seq
DB search
MALSMNLQQKLETKFILNQQQKFSLEILKYSMQELVDYIHDEVNSNPILEAEGPLYEEKQ
LIEFARLDRNQNAKSEAIEHEQFDSINLLRSTEQSLEKYLTGQLSMVKNLTLLDRKIILF
YIHSLNSNGYLECDLNEVAEMYTVPISKCEELLTILHGFEPYGVGARNLKECLLLQIKHQ
KNAPKLAEVFVQLHLEELADRRFLHISELYQIPEETVKNIFSYIQQLNPFPANEFDTGQT
EHIIPDIIVEELHGEYIIRINESYLPQISINTYYDELMKTNEDVKGYLKGKLSDALLLLK
GIEQRHETLYKVTKILLEKQQAIFKNGLKALQPLRLKDVAEQMDVHESTVSRAISKKYIQ
TPKGIFPLKMLLMRGLKMNNGSMESTILIKEKIKSMIENENVKKPYSDQKIANILLAEGI
QIARRTVAKYREEMGILQSTKRIKR
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggctttatcaatgaatttacaacaaaagcttgaaactaaatttatcttaaatcaacaa
caaaagttttccttagagatactaaaatattcaatgcaagagctagtagattatatacat
gatgaagttaactccaatcctattttagaagcagagggccctctttatgaagaaaaacag
ttaattgaatttgcgcggttagatcgtaatcaaaatgcaaaatcagaggctattgaacat
gaacaatttgattctatcaatctattaagaagtacagagcaatctttagaaaaatatttg
actgggcagttgtctatggttaaaaacctaacattattggataggaaaattattctattt
tatattcatagtttaaatagcaacggttatttagaatgtgatttgaatgaagtagctgaa
atgtatactgtcccaatttcaaaatgtgaagaattgctcaccatattacatggctttgaa
ccatatggagtaggggcaagaaatttaaaggaatgcctattattacaaataaaacaccaa
aagaatgccccgaaattagcagaggtgtttgtacaacttcatttggaagagttagcagat
agaaggttcttacatatttcggaactatatcaaattcctgaagaaacggtcaaaaatatt
ttttcatacattcaacagctaaacccattcccagcgaatgaatttgatacgggtcagact
gaacatatcatcccggatattatagtagaagaactccatggagaatatattattcgcatt
aacgaaagctacttacctcaaatttcgattaatacttattatgacgagttaatgaaaacg
aacgaggatgtaaaaggatatttgaaagggaaactttcagatgccttacttttactaaag
ggaatcgaacaaagacacgaaacattatataaagtgactaaaattttattggaaaaacaa
caggcaatctttaaaaatgggttaaaggcattacagccgttaagattaaaagacgtagct
gaacaaatggatgtacatgaatcaacagtaagccgtgcaataagcaaaaagtacattcaa
acaccaaaagggatatttcctttaaaaatgttgttaatgcgcgggttgaaaatgaataat
ggttcgatggaatctactatattgataaaagaaaaaattaaatcaatgatagaaaatgaa
aacgtaaaaaagccttattccgatcaaaaaattgcaaatattttactagctgagggtatc
caaatcgcaaggagaacggtcgcgaaatatcgggaggaaatggggatattacaatcaacc
aaaagaataaaaagataa
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