Lysinibacillus sp. PLM2: MTP04_09850
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Entry
MTP04_09850 CDS
T09546
Symbol
uvrB
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
lyp
Lysinibacillus sp. PLM2
Pathway
lyp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lyp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MTP04_09850 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lyp03400
]
MTP04_09850 (uvrB)
DNA repair and recombination proteins [BR:
lyp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MTP04_09850 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MTP04_09850 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_19
AAA_22
AAA
AAA_7
AAA_16
HEM4
UB2H
HerA_C
TrwB_AAD_bind
Oxidored_nitro
P-loop_SecA
PMT2_N
COG5_N
DUF87
AAA_25
UvrD-helicase
DUF8810
YosV
Motif
Other DBs
NCBI-ProteinID:
BDH60855
LinkDB
All DBs
Position
1025221..1027197
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AA seq
658 aa
AA seq
DB search
MTFELQSPYQPSGDQPEAIKQLVQGVKEGKRHQTLLGATGTGKTFTISNVIKEVNKPTLV
IAHNKTLAGQLYSEFKQFFPNNAVEYFVSYYDYYQPEAYVPQTDTYIEKDSSINDEIDKL
RHSATSALFERDDVIIIASVSCIYGLGNPEEYREMVVSIRTGMEIERNQLLRKLVDVQYE
RNDINFQRGTFRVRGDVVEIFPASRDEHCIRVEFFGDEIDRIREVDALTGEILGERDHVA
IFPASHFVTREEKMKIAIENIKKELEEQLEKFRSEDKLLEAQRLEQRTNYDLEMMSEMGF
CSGIENYSRHLTLREPGVTPYTLLDYFPKDFLLVVDESHVTLPQVRGMYNGDQARKQVLV
EHGFRLPSALDNRPLKFEEFEEHLHQAIYVSATPGPYELEHTPEMVEQIIRPTGLLDPTI
DVRPIEGQIDDLIDEIQIRIKRNERVLITTLTKKMSEDLTDYLKEMGMKVEYLHSEIKTL
ERIEIIRELRKGTYDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTIGRAA
RNANGHVIMYADNMTDSMKKAIDETKRRRSIQEAYNKEHGITPKTIQKKIPDLIRATQAA
EEEETYVTKVTKGKKLTKSEIKALIAKLELEMKEAAKALDFERAAELRDTIFELKVEG
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgacatttgaattgcaatccccctaccaaccaagtggtgatcaaccagaagcgatcaaa
caactagtgcaaggtgttaaagaaggaaaaagacatcaaacattacttggagcaacaggt
acaggaaaaacatttaccatatccaacgttataaaagaagttaataaacctacgcttgta
atcgcacataataaaacacttgctggtcaattgtacagtgaatttaagcaattttttcca
aacaatgcagttgaatatttcgttagttattacgattactatcaaccagaagcctatgta
ccacaaacggatacatatatagaaaaagattctagtattaacgatgaaattgataaacta
agacattctgcaacgagtgctctatttgaaagagatgatgtcattatcattgcatctgtg
tcatgtatttacggtttagggaatccggaagaatatcgagaaatggtcgtatccatccga
acaggaatggaaattgaacgaaatcaactattacgaaagctagtcgatgttcaatatgaa
cgcaatgatattaacttccaacgaggtacattccgtgtacgtggtgacgtggttgaaatt
ttcccggcatcccgtgacgagcattgtatccgtgtggagttttttggagatgaaattgat
cgtatccgtgaagtcgatgcactaactggagaaattttaggtgaacgtgatcatgttgca
attttcccagcatctcacttcgtaacacgtgaagagaagatgaaaatcgccattgaaaat
attaaaaaagaattggaagaacagctagaaaaattccgctcagaagataagttacttgaa
gcgcaaagacttgagcaaagaacaaattatgatttagaaatgatgagtgagatgggcttc
tgttcaggcatcgagaactattcacgtcatttaacattgagagaaccaggtgtgacacca
tatacattgctcgactatttcccaaaagattttttacttgttgtggacgaaagccatgta
acattaccacaagtaagaggaatgtataatggagaccaggcaaggaaacaagttttagtg
gaacatggattccgtctaccgtctgctttagataacagaccattaaaatttgaagaattt
gaagagcatctacatcaagctatttatgtatcagctacacctggaccgtatgaattggag
catacaccagaaatggtagaacaaattattcgtccaacagggttgcttgatccaacgatt
gatgttcgaccaattgaagggcaaattgatgatttaatcgatgaaattcaaattcgtata
aaacgaaatgagcgtgtgttaatcacgacattaacaaagaaaatgtctgaagatttaacc
gattatttaaaagaaatgggaatgaaggtcgaatatcttcactctgaaataaaaacactt
gaacgaattgaaatcattcgggagcttcgaaaaggaacgtatgatgtacttgtaggtatt
aacttacttagagaaggtcttgatataccagaagtatctttagtagccattcttgatgcg
gataaagaaggtttcttacgttctgagcgttcattgattcaaacaatcggaagagctgcc
cgtaatgcgaatgggcacgtcattatgtatgctgacaatatgaccgattcgatgaagaag
gcaattgatgaaacaaaacgccgtcgttctattcaagaggcatataacaaagaacatggc
atcacgccaaaaaccattcagaaaaaaatcccagatttaattcgtgcaacacaagcggca
gaagaggaagaaacatacgttacaaaggtgacaaagggcaaaaaattaacaaagtccgaa
ataaaagcgttaattgcaaaattagaactagaaatgaaagaagcagcaaaagcgcttgat
ttcgaacgtgctgctgaactgcgagatacaatattcgaactgaaggtagaagggtga
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integrated database retrieval system
