Lysinibacillus sp. PLM2: MTP04_19610
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Entry
MTP04_19610 CDS
T09546
Symbol
rlmCD_1
Name
(GenBank) 23S rRNA (uracil-C(5))-methyltransferase RlmCD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
lyp
Lysinibacillus sp. PLM2
Brite
KEGG Orthology (KO) [BR:
lyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lyp03009
]
MTP04_19610 (rlmCD_1)
Enzymes [BR:
lyp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
MTP04_19610 (rlmCD_1)
Ribosome biogenesis [BR:
lyp03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
MTP04_19610 (rlmCD_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
MTS
TRM5-TYW2_MTfase
Methyltransf_15
PrmA
Methyltransf_11
Ubie_methyltran
Methyltransf_4
Cons_hypoth95
PCMT
Motif
Other DBs
NCBI-ProteinID:
BDH61831
LinkDB
All DBs
Position
complement(2026928..2028313)
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AA seq
461 aa
AA seq
DB search
MTITKGETLVVDINKLDEKGSGRAVVWRENEKGVSKKLRLTIPQTLPGEKVQVTVDNPER
RRRKAILEEVLEPNLERIPAPCPHFEKCGGCVWQHWDYQGQLKQKTNHVKDAIESQGFDP
KLVRDTIGMDNPWHYRNKMEFTFSKDGSLGLHEQGNFRKVISLETCLIAGKEMVEAAMEV
ADWAKTHELSGYDKDAHEGLLRHLMVRQSFATGEMMLALFATEPPVENAANDLVKRVQEK
FPQVKSLLWLENTAWADRTQSEKTHVLDGRDFIYDEMSGYRFRLWFDTFFQTNPTQAQKL
VDLAIEIGQPKKSEKMIDLFCGVGTFSLPFAARVGELAGIEIVETSIESAKRNAADNGID
NTYFLAKDARKGIDEVLETFGSPELLLLDPPRSGAGGKVMRRIGRSKPQRIVYVSCNPDT
FATDIKELEQFGYVLKDVQPVDLFPHTVHVECISQLVLKND
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
ttgacgattactaaaggtgaaacattagttgttgatataaataaattagatgaaaagggt
tctggtcgtgcagtggtatggcgtgagaatgaaaaaggcgtttcaaaaaaattacgtctg
actattccacaaacgcttcctggagaaaaagtacaagtgacggttgataatccggaacgt
agaagaagaaaggctattcttgaggaagttttagaaccaaatttagaaagaattccagca
ccatgtccacattttgagaaatgcggtggatgtgtatggcagcattgggactatcaaggt
caattgaaacaaaaaacaaatcatgtgaaggacgctattgaatcacaaggatttgatcca
aaattagtacgcgatacgatcggaatggacaacccgtggcattatcgaaataaaatggag
ttcactttttctaaagatggttcattaggtttacatgaacaaggaaacttccgaaaagtg
atttcccttgaaacttgtttaatcgcgggtaaagaaatggttgaagcagcaatggaagta
gcagattgggcaaaaactcacgagttgtcaggttatgataaagacgcacacgaaggctta
ctacgtcatttaatggtaagacaatcctttgcaacgggtgaaatgatgcttgcattattt
gcaacagaaccacctgttgaaaatgctgctaatgatctagttaaacgtgttcaagagaaa
ttccctcaagtaaagagcttattatggcttgaaaatacagcttgggctgatcgtactcaa
tcagaaaaaactcatgtcttagatggtcgtgactttatatacgatgaaatgagtggctat
cgtttccgtctttggtttgatacattcttccaaacaaatcctactcaagctcaaaaatta
gtagatttagcgattgaaattggtcaaccgaagaaatcggaaaagatgattgatctattc
tgcggtgttggtacattctcacttccatttgcagcaagagtaggggaattagccggtatt
gaaatcgttgaaacatcgattgaatccgcaaaacgcaatgcggcggataatggtatagat
aacacatacttcctagcaaaagatgctagaaaaggaatagatgaagtgttagaaacattc
ggtagtcctgaattacttttacttgacccaccacgatcaggtgcaggtggtaaagtaatg
agaagaatcggtcgttctaaaccacaacgtattgtctatgtatcatgtaatccagataca
ttcgcgactgatataaaagaacttgagcaatttggttatgtactaaaagatgttcaacca
gtggatttattcccgcatacagttcatgtagagtgcatttcacagttagttttaaaaaat
gattga
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