Lysinibacillus sp. PLM2: MTP04_23800
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Entry
MTP04_23800 CDS
T09546
Symbol
sigA
Name
(GenBank) RNA polymerase sigma factor SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
lyp
Lysinibacillus sp. PLM2
Pathway
lyp02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
lyp00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
MTP04_23800 (sigA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lyp03021
]
MTP04_23800 (sigA)
Transcription machinery [BR:
lyp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MTP04_23800 (sigA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Exonuc_VII_L
DegQ
Motif
Other DBs
NCBI-ProteinID:
BDH62250
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All DBs
Position
complement(2399657..2400784)
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AA seq
375 aa
AA seq
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MADKSERSNEVVSDQKLEEVKKLLQEKAIKEREISMREISNSLASFDLENEEIFSFADDL
EKHHEVTVNGKEEFEEEALSKQEASEEEFDLNDLSVPPGVKINDPVRMYLKEIGRVDLLT
AEEEIELAERIEQGDEEARKRLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNMGLIKAVE
KFDYRKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVQRQLLQDLGRE
PSPEEIGEEMDLTPEKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDHEAQSPSDHAAY
ELLKEQLEDVLDTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRK
LRHPSRSKRLKDFLE
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggctgacaagtcagaacgttcaaatgaagtagttagtgatcaaaaattagaagaggta
aaaaaacttctccaagagaaagcaataaaagaacgtgaaatatcaatgagagaaatttca
aattcacttgcttcatttgatttagaaaatgaagaaatctttagttttgctgatgattta
gaaaaacatcatgaagtaacagtaaatggtaaagaggaatttgaagaagaggctctatca
aaacaagaagcgagcgaagaagaattcgatttaaatgacttaagtgttcctcctggagtg
aaaataaacgaccctgtaagaatgtatttaaaagaaatcggaagagtagacctactaact
gcggaagaagaaatcgaacttgcagagcgtattgaacaaggtgatgaggaagcaagaaaa
cgtcttgcagaagcaaaccttcgacttgtagtctccattgcaaaacgctatgtaggacgc
ggcatgcttttcttagacctaatccaagaaggaaatatgggcttaatcaaagcggttgaa
aaattcgactatcgtaaagggtttaaattttctacttacgcgacatggtggattcgtcaa
gcgattacacgtgctattgctgaccaagcgcgcacaatccgtattccagtgcacatggtt
gaaacaattaataaattaattcgtgttcaacgtcaattgttacaagatttaggtcgtgaa
ccatctccagaagaaataggagaagaaatggatcttactcctgaaaaggttcgtgaaatc
ttgaaaattgcacaagagccagtatctttagaaacacctattggtgaagaagatgattct
cacttaggtgactttatagaagatcatgaagcacagtctccatcagaccatgctgcatac
gaacttttaaaagaacagctagaagacgtattagacacattaacagatagagaagaaaat
gttcttcgtttacgttttggtttagacgatggacgtacacgcacacttgaagaagttggc
aaagtatttggtgttacacgtgagcgtatacgtcaaatagaagcaaaagctctaagaaag
ctacgtcatccttctagaagtaaacgtttgaaagactttctggaataa
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