Lysinibacillus sp. PLM2: MTP04_26970
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Entry
MTP04_26970 CDS
T09546
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
lyp
Lysinibacillus sp. PLM2
Pathway
lyp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lyp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MTP04_26970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lyp03400
]
MTP04_26970
Enzymes [BR:
lyp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
MTP04_26970
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
MTP04_26970
DNA repair and recombination proteins [BR:
lyp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MTP04_26970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
ZNF512_C2HC
Zn_ribbon_3
Zn_ribbon_IS1595
Motif
Other DBs
NCBI-ProteinID:
BDH62567
LinkDB
All DBs
Position
complement(2700361..2701233)
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AA seq
290 aa
AA seq
DB search
MPELPEVEGVVRALSPAVEGKKIAKVELSKTIYESCAAGKQCIVKNMDPIAFEEVMQGMA
IHKVTRRSKYIYFDVEKHDQHYLFVNHLGMTGAWFVVQSIHDIHEEKFKKHVHAIFHLTS
GEMLIYSDIRRFGEMRLLFNIEDHPPLLEMAPEPFEEEALNYFLKKCELPKYQNKPIKEV
IMDGQVISGCGNIYATEALFKMGIHPGRKTSRISKTRKKELFETIRTILQESIDNGGSTI
SDYRNVNGEAGSMQHRLKMYGKKVCPNCGSLTKSLIIGGRTSVYCPQCQH
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattacctgaggtagaaggagttgttcgggcgctttcgccagcagtagaaggt
aaaaaaattgcgaaagtcgaactatccaaaacaatctatgagtcatgtgcagctggaaag
caatgtatagttaaaaatatggatccaattgcatttgaagaagttatgcaaggtatggcg
attcataaagtgacgagaagatcgaaatatatctattttgatgtagaaaaacatgaccaa
cattatttatttgttaatcacttagggatgactggtgcatggtttgttgtacaaagcata
catgacattcatgaagaaaaatttaaaaagcatgttcatgcgatctttcatttaacatca
ggtgagatgcttatctattcagatattcgtcgttttggagaaatgcggttactattcaac
attgaagatcatccgccactgttagaaatggcacctgaaccatttgaggaagaagcatta
aattatttccttaagaaatgtgaacttcctaaatatcaaaataagccaattaaagaagta
attatggacggacaagtgatttctggctgtggaaatatatatgcaactgaagcattgttt
aaaatgggcattcatccagggagaaaaaccagtcgaattagtaaaacacgtaaaaaggaa
ttgtttgaaactatccgtactattttacaagaaagtattgataatggcggttcaactatt
tctgattatcggaatgtaaatggcgaagcgggtagtatgcagcaccgattaaaaatgtat
ggaaaaaaagtatgtcccaattgcgggtcattaacgaaatcgttgattattgggggaaga
acttccgtttattgtccacaatgtcaacattaa
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