Lysinibacillus sp. PLM2: MTP04_27150
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Entry
MTP04_27150 CDS
T09546
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lyp
Lysinibacillus sp. PLM2
Pathway
lyp03030
DNA replication
lyp03430
Mismatch repair
lyp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lyp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MTP04_27150 (dnaE)
03430 Mismatch repair
MTP04_27150 (dnaE)
03440 Homologous recombination
MTP04_27150 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lyp03032
]
MTP04_27150 (dnaE)
03400 DNA repair and recombination proteins [BR:
lyp03400
]
MTP04_27150 (dnaE)
Enzymes [BR:
lyp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MTP04_27150 (dnaE)
DNA replication proteins [BR:
lyp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MTP04_27150 (dnaE)
DNA repair and recombination proteins [BR:
lyp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MTP04_27150 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
BDH62585
LinkDB
All DBs
Position
complement(2720965..2724054)
Genome browser
AA seq
1029 aa
AA seq
DB search
MNSYPQIRTSADLLKSTIRIEELIPFLQQQKAEACAIVNSKLYGLLPFWHAVKKAGIHPV
VGLKVYVHYENSTLPIILYAKTNEGYKNLLKITSGISIRDDELLPFRWLLGYSKGLAIVL
PVLEEKGIWLEEENREILFQINKTFTDVLIGISRAGGHVSPFEEFAISISNILNCSVMAI
HECLFLKPEDHFAFEVAEAIQTGIKLSDKKDRSVTSNQYVPTSQEWKEWFNDHPEWIEES
SRLLKSCLVEFEHNQSFMPKYPLPEGVHAEDILYEQALTGLKERLQSMPNEIYLDRLRYE
LSIINSMGYADYFLIVSDFMKFAYDAKILTGPGRGSSASSLIAYALRITQVDPIKYGLLF
ERFLNPERITLPDIDIDFVDTRRHEVIEYVAKKYGKGQVAQIITYGTLSAKAVARDVARM
FNFESETLEMISKLIPNKLGITLEEAYSSSESLRKWIEGEPIRLRWFEAAKKLEGLPRNA
STHAAGVILSPVPLVDVVPIEKGHDDIYLTQWPMQEVEQLGLLKMDFLGLRNLTVIEQIR
KAILYSTNIDLDLNQIPLNDERTYQLLQNGDTAGIFQLESEGMQNALREIKPTQILDIVA
VNALYRPGPMEFISNYAKRKAGIEPVYMPHQALEPILKETYGIIVYQEQIMQIANVMAGF
TLGQADLLRRAVSKKNREILEEQRTTFVTGAVRKGFTENIANEVYELIVRFANYGFAKSH
AVAYSFISYQMAYLKANYPVHFYAALMTNSIGNPDKLFQFMLEAKNKGIEILKPSIFKSY
RHFAVENGKIRFSLSVIKGVSQNFIKKLMEIRNNKEQPFGDIFDLATSLSATLFTRKEIE
PLIKAGALDDFGKDRASLLATIDAAEKHAKIVRPTEEVNLFTQHPTIFGKPKYIEVEPIP
QKIKLQFEKEVLGFYLTEHPITLIRQSVGDIHVTTKNLRNLRPNTFVKLVGLVETIRQVR
TKKGELMAFVQLTDEFGYVSLTLFPKEYNGVMGWIKEELTIIVEGQLEMRNGKPQIKTKA
IYQAQNANI
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
ttgaatagctatccgcaaatacgaacaagtgccgatttattaaaaagtacaattcgtata
gaagagctcatcccctttttacaacaacaaaaggcagaagcatgtgcaatcgtaaattct
aaattgtacgggcttttgcctttttggcatgctgttaaaaaggcaggaattcatcctgta
gtaggtttaaaggtttatgtacattatgaaaactccacactcccaatcattttatatgct
aaaacaaatgaaggttataaaaaccttttgaaaataacaagtggtatttccattcgtgat
gatgaattgttgccgtttcgatggttattaggatattcaaagggtttagcaattgtcctc
cctgtacttgaggaaaaaggcatttggttagaagaagaaaatagagaaatccttttccaa
attaataaaacatttacagatgttcttattggtatttcacgagctggtgggcatgtgtct
ccatttgaagagtttgcaattagcataagcaatatattgaactgtagtgttatggcaatt
catgaatgcttattcttaaagccagaagatcattttgcttttgaagttgcagaagctatt
caaaccggcattaaattaagtgataaaaaggatagaagtgtaacgagcaatcaatatgtt
ccaacatcccaagaatggaaagaatggtttaatgatcatcccgagtggattgaggagagt
agtcgtttgttaaaaagctgtctcgttgaatttgagcataatcaatcatttatgccgaag
tacccattaccagaaggcgttcatgccgaggatattctctatgaacaggctttaacaggg
cttaaggaacggttacaatcaatgccaaacgaaatttacttagaccgacttcgttatgaa
cttagtattatcaattcaatggggtacgctgattattttttaatcgtttctgactttatg
aaatttgcctacgatgcaaaaattttaactggacctggacggggatcttcggctagttcg
ttaatagcatacgcactccgtattacccaggtagaccctattaaatatgggttactattt
gaacgttttttaaatcccgagagaattacattgcctgatatcgatattgactttgttgac
actcgtagacatgaagtaattgaatatgttgcaaaaaaatatggaaaagggcaagttgca
caaatcatcacttatggaacattgtctgcaaaagcggttgctagagatgtagcgcgaatg
tttaattttgaaagtgaaacacttgaaatgatctccaaattaataccgaacaaactagga
attactttagaagaagcctactcgtcttcagaaagtttaagaaagtggattgaaggtgaa
ccgattagattgcgatggtttgaagctgcaaaaaagctagaaggactaccaaggaatgct
tcaacacatgcggctggagtaattctaagtccagttccattagttgatgtcgtgccgatt
gaaaaaggacacgacgatatttatttaacacaatggccgatgcaagaagtagaacagctg
ggcttattaaaaatggactttttaggattacgaaatttaacagtcattgaacaaatacgt
aaagcgattttatattcaacgaacattgatcttgatttaaatcaaatccctttaaatgat
gaaagaacgtatcaacttctgcaaaacggcgatacagcaggtatatttcaattagaatcg
gaaggcatgcaaaatgctttgcgtgaaataaagccgacacaaattttagatatcgttgca
gtaaatgctttatacagaccaggtccaatggagtttatttcgaattacgcgaaaagaaaa
gcgggtatagagcctgtttatatgccacaccaagcattagagccgatattgaaagagacc
tatgggattatcgtctatcaagagcaaatcatgcagatcgccaatgtgatggctggtttt
acattgggacaagcagatttattgagaagagcagtaagtaaaaaaaatcgagaaatatta
gaagaacaacgtacaacttttgtaacaggagcagttcgtaagggctttacagaaaatata
gcaaatgaagtctacgaactgatcgtacgctttgcaaactatggatttgctaaaagtcat
gctgtcgcctatagttttatttcctatcaaatggcttacttaaaggcaaactatccagtg
catttttatgctgctttaatgacgaattcgatcggcaacccagataaattattccaattc
atgttagaagcaaaaaataaaggaatcgaaatacttaaaccatctatatttaagagctat
cgtcattttgctgtggaaaatggaaaaattcgatttagtttatcagttataaaaggtgtc
tctcaaaattttataaaaaaattgatggaaatccgaaataataaagaacaaccttttggt
gatatttttgatttggccacttcattaagtgctacattgtttacacggaaggaaattgag
ccgcttattaaagctggagcattagacgattttggtaaagatcgtgcaagtttgctagcg
acaattgatgcagctgaaaagcatgcaaagattgttcgcccaacggaagaagtgaattta
tttacacagcatccaactatttttggtaagccgaagtacattgaggttgagccaatacca
caaaagataaagttacaatttgaaaaagaagtgttaggcttctacttaacagaacatcct
attacattgattagacaatcagttggtgatatccatgtcactacgaaaaaccttagaaac
ctccgtccaaatacatttgtgaagcttgttggtcttgtagaaacaattcgacaagtaagg
acaaaaaaaggtgaattaatggcatttgttcaattaacagatgagtttggatatgtttca
ttaacactctttccaaaggagtataatggggttatgggctggataaaagaggaactgact
attattgtagaaggtcaactagaaatgcgaaatggtaagcctcaaattaaaacaaaagcc
atttatcaagcacaaaatgctaatatctag
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