Lysinibacillus sp. PLM2: MTP04_30950
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Entry
MTP04_30950 CDS
T09546
Symbol
yhaM
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
lyp
Lysinibacillus sp. PLM2
Brite
KEGG Orthology (KO) [BR:
lyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lyp03019
]
MTP04_30950 (yhaM)
Messenger RNA biogenesis [BR:
lyp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MTP04_30950 (yhaM)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
REPA_OB_2
Hormone_recep
Motif
Other DBs
NCBI-ProteinID:
BDH62965
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All DBs
Position
complement(3139490..3140425)
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AA seq
311 aa
AA seq
DB search
MEGITKLQVGEQVDQFLLIKQATKGVTTVGKPFMSLVLQDKSGDIEAKLWDTNEDHEQMY
RAEVIVRVGGEIHDYRGKNQLRIKQIRIAKPEDGISINDLVPSASTPKEELYEELTQYFF
EIKNPHISRITRHIIKKYQDDILVFPAATKNHHDYASGLLDHVVSMLRLGKAICDLYPTL
NRDLIYAGVILHDIGKVKELSGPIATTYTVEGNLLGHISIMVDEIGKAAEELGIDGEEVV
LLKHIVLSHHGKEEWGSPKKPMIQEAEILHYIDNIDAKMNMLTRALGKTKPGEFTERLFA
LDNRSFYKPLI
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
gtggaaggaattactaaactccaggtcggggaacaagttgatcaatttttattaataaaa
caagcgacaaagggtgtaacaactgttggcaaaccatttatgtcacttgtgctgcaggat
aaaagtggagatatagaagcaaaactttgggatacaaatgaagatcatgaacaaatgtat
agagcagaagtaattgttcgtgttggtggggaaatccacgattaccgtgggaaaaatcaa
cttcgaataaaacaaatcagaatagcaaaaccagaagatggtattagtattaatgattta
gtcccttcagcttctactccgaaagaggagctttatgaggagctaactcaatatttcttt
gaaataaaaaatcctcacatttctaggattacaagacatattataaaaaaatatcaagat
gatatattggttttcccagcagcaacgaaaaatcatcatgactatgcatcaggcttacta
gatcatgttgtttcaatgctacgtttaggtaaagcgatttgtgatttatatccaacatta
aacagagatttgatctatgcaggagtcattttacacgatattgggaaagtaaaggaacta
tcaggacctattgcgacaacttatacggtagaggggaatttactcggacatatttcaatt
atggttgatgagattggaaaagctgctgaggagttaggtatcgatggagaagaagtagta
ctactgaaacatatcgtgctatcccatcacggaaaagaagaatggggaagccctaaaaag
ccaatgattcaagaagcagaaattctacattatattgataacattgatgcgaaaatgaat
atgttaacaagagcattggggaaaacaaagccgggtgagttcacagaacgtctatttgca
ttagataatcgttcattctataagccgctaatttaa
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