Lysinibacillus sp. PLM2: MTP04_32290
Help
Entry
MTP04_32290 CDS
T09546
Symbol
sbcC
Name
(GenBank) nuclease SbcCD subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
lyp
Lysinibacillus sp. PLM2
Brite
KEGG Orthology (KO) [BR:
lyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lyp03400
]
MTP04_32290 (sbcC)
DNA repair and recombination proteins [BR:
lyp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MTP04_32290 (sbcC)
Archaeal homologous recombinant proteins
MTP04_32290 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
Spectrin_Anc-1
Zn_Ribbon_TF
Motif
Other DBs
NCBI-ProteinID:
BDH63099
LinkDB
All DBs
Position
complement(3280531..3283608)
Genome browser
AA seq
1025 aa
AA seq
DB search
MKPIKLTMRAFGPYKREEIIDFTRLHDNRLFVISGTTGAGKTTIFDGICFALYGQGSGSD
RKDTKMLRSDFAEDDVHTAVELVFEIHNKTYRVLRQLPHVKKGRKAATGEKYELFEIQEN
GLEVAAVERQKVTDINQKIVEIIGLTYDQFSQIVMLPQGEFRKLLTSQTENKEEILRKIF
KTNRYGEMAQKLETKKQQAEQQLNKAQVLKNSYIEQISGALPRRDSYLFSVLDKQSNIYQ
IQDALKEELSYYQDKVVEDYRLYEKAFEMHKQKYELFVANKTLNDRIETYEKSVVRLSEL
QQQNPLFERMKLEYDASIRASQIEPIYQQLLIFENERDAQTQKLEQVTRQLELAKEKLSQ
SKIKYENEQKNHSKREAALKKVLDLEKLIPAFEEIEKLQKLVASIEEETTQNKEKVTQLE
YQLQLKKDLRRELNFAIEQLELNTEKIQDIVGEQNRLKEVIQLLNQYSEIQNKLTLLNEQ
YEEVLNNFESAKEHYEIEELKWLNNQAAILAAKLLPGEPCPVCGSVEHQVVNRDHGEILD
EKVLKQLKDSLSKVEQNKFEYQATIHATNTQLENIKSTLESNNVKIEDQALLFEKYTEIS
LKLEKIQKENELLSTKRKQLKVILQEEQTLESQFKMWEQQYNEKINQHIQQKTILEQKQL
SIPVELKTLSELQGALQLALKDKKSLEQQWEIAQKQYQSSLTEVATTEENLKLTSLRVEE
AIKNLKKHEAQFRDALKSARFESIDDFIRSKRTDLEQKHLYDQYLNFTKVLHSLTEQVKI
EKEQLDGKEKIDLKEAQEELDGLKRDYERAHQILNESKNIEQICLDYLNKLQHIGQEIVD
LEETSNQIVNLYNVLRGQNNKKVSFERYVQMGYLEQITEAANIRLKNLSNGQFYLQCSDR
QESHGRQSGLSLDVYDTYTGQSRDVKSLSGGEKFNASLCLALGLADVIQSYQGNVRIDTM
FIDEGFGSLDEESLIKAIDTLIDLQKSGRMIGVISHVAELKAAMPAILQVEKLKEGYSKT
SIILK
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atgaagcctataaaattaacgatgcgtgcttttggaccttacaaaagagaagaaattatt
gattttacgagattgcatgataatcgactattcgtcatttctggaacaacaggcgcagga
aaaacaacaatttttgatggtatttgttttgctttatatggacaaggtagtggatcagat
cgaaaagatactaaaatgctaagaagtgactttgcagaagacgatgtccatacggctgtt
gagctagtgtttgaaatacacaataagacttatcgtgtactacgccaattacctcatgtg
aaaaaagggagaaaagctgcaacaggcgaaaaatatgagctatttgaaattcaagaaaat
ggtttggaagtagcggctgttgaaagacaaaaagtaacggatattaaccaaaagattgtt
gaaattatcggcttaacctatgaccaatttagccaaattgtaatgcttccacagggggaa
tttcgaaagctattaacatcccaaactgaaaataaagaggaaatccttaggaaaatattt
aaaacaaatcgttatggtgaaatggcgcaaaaactagaaacgaaaaaacagcaagcggaa
caacaattaaataaagcacaggtcttaaagaatagttatatagagcagatatcaggagca
ttgccgagacgagattcttaccttttttctgttctagataagcaatcgaatatctatcaa
atacaagatgccttgaaggaagagctttcctattatcaagataaagttgttgaggattat
agattatacgagaaagcatttgaaatgcataaacagaagtatgaattattcgttgctaat
aaaacattaaatgatcgtatcgagacctatgaaaaaagtgtagtaaggttatcagagctt
cagcagcaaaatccattatttgaaagaatgaaacttgaatatgacgcttcaataagggcg
agccaaattgagccaatctatcaacagcttttaatatttgaaaatgaaagggatgctcaa
acacagaagttagaacaagtaacaagacaattagagcttgctaaagaaaagctatcacag
tcaaaaataaaatatgagaatgaacaaaaaaatcatagtaaacgagaggcagcattaaaa
aaagttctagatttagaaaaactaattcctgcctttgaagaaattgagaaactacaaaag
cttgttgcatcgattgaagaggaaacgactcaaaataaagagaaagtaacacaactagaa
tatcaacttcaactaaaaaaagatttgcgtagggaacttaattttgctattgaacagcta
gagttaaacacagagaagattcaagatattgttggtgagcaaaatcgacttaaagaagtt
attcaactattaaatcaatatagtgaaatccaaaataaattaacattacttaatgagcaa
tatgaagaagtgttaaataattttgaaagtgcaaaggaacattatgaaatcgaagaactg
aaatggttaaataatcaagcagctattttagccgcaaaattattacctggagagccctgt
ccagtttgcggaagtgtagaacatcaagtagtaaatcgtgaccatggtgaaattttagac
gaaaaagtactaaaacagttaaaagattcattgtcaaaggttgaacaaaataagtttgaa
tatcaagcaaccatccatgcaacaaatacacaattagaaaatataaaaagtacattagaa
agcaataatgtaaaaattgaagaccaagcattattatttgaaaaatatactgaaataagc
ctaaaactcgagaagatacaaaaggaaaatgaacttctttcaactaaacgaaagcagtta
aaagttattttacaagaggaacagacgcttgaatcacaatttaaaatgtgggaacagcag
tataacgaaaaaattaaccaacacatacaacaaaaaacaatattagaacaaaagcaatta
tcgattcctgttgaattgaagacgcttagtgaactccaaggggcattacaattggctcta
aaggataaaaagtctcttgagcaacagtgggaaattgctcaaaagcaataccaatcttcc
ctaacagaggtcgctactactgaagaaaacttaaagctcacttcactgcgagtagaggaa
gctatcaaaaatctaaaaaaacacgaagcacaatttagggacgctttaaaaagtgctaga
tttgaaagtatcgatgactttattcgatcaaaacgtactgacttagaacagaaacattta
tatgatcaatacttaaattttacgaaggtacttcattcattaactgaacaagtaaaaata
gaaaaagaacaattagatggtaaggaaaaaatagatttaaaagaagcgcaagaggaacta
gacggattaaaaagggattatgaaagagcacatcaaatactaaatgaatcaaaaaatatt
gaacaaatttgtttagattatctaaacaagcttcaacacatcggacaagaaattgttgac
cttgaagaaacttcgaatcaaatcgttaatttatataatgtattacgcggtcaaaacaac
aaaaaagtttcatttgaacggtatgttcagatgggctatttagagcaaataactgaagct
gccaacatacgattaaaaaacctatcaaatggtcagttttatctccagtgctcagataga
caggaatctcacggacgtcaaagtggattaagcttggatgtttatgatacgtatactggg
caatctagggacgtaaaatcattatcaggtggagaaaagtttaatgcttcattatgtctt
gctttagggttagcagatgttatacaaagctatcagggaaatgtaagaatagatacgatg
tttatagatgaggggtttggctctcttgatgaagaatcgttgataaaagccatcgataca
ttaatcgatttacaaaaatcagggagaatgatcggtgtaatttctcacgttgccgaatta
aaagcagctatgccagcaattcttcaagtagagaaattaaaagaaggttatagtaaaacg
tcaattatcttaaaatga
DBGET
integrated database retrieval system
