Lysinibacillus sp. PLM2: MTP04_32300
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Entry
MTP04_32300 CDS
T09546
Symbol
sbcD
Name
(GenBank) nuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
lyp
Lysinibacillus sp. PLM2
Brite
KEGG Orthology (KO) [BR:
lyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lyp03400
]
MTP04_32300 (sbcD)
DNA repair and recombination proteins [BR:
lyp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MTP04_32300 (sbcD)
Archaeal homologous recombinant proteins
MTP04_32300 (sbcD)
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Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_3
DNA_pol_E_B
Motif
Other DBs
NCBI-ProteinID:
BDH63100
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Position
complement(3283605..3284780)
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AA seq
391 aa
AA seq
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MKIFHTADWHLGKLVQGVYMTEEQEYVLNQFIQAIDDEQPDVVIIAGDLYDRAVPPVEAV
NLLDSVLAEIVLKRKIPVLSIAGNHDSPTRVGFGHQILKGSGLYIAGELTEYIEPIILHD
KFGEVHFYLVPYTEPSTVKNIYEDDTISNFNEAMQKVIERIEQNMDKSKRQVFIGHAFVT
PHGEMEENTSDSERPLSIGGSEYVSAEHFKPFHYTALGHLHKAHYVLNETIRYSGSPLKY
SSSEANHEKGFLVVELDEKGQVLVSKRTFQPRRDLRIVEGTLQDILKHEVSEDYVFVRLL
DITPVVGAMEQIRTVYPNAMHVERKTIQQNIITGENVTVQRAQLDDLSLFKAFYNEIVGT
EPSESTEKLFREVLAEMLTDERESKEMVISK
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatctttcataccgcagattggcatttagggaagcttgttcaaggtgtttatatg
actgaagagcaagaatatgtattaaatcaatttatacaggccattgacgacgaacagcca
gatgtcgtaattattgcaggggatttatatgatcgtgctgttcctcctgtagaagcagta
aatttactcgattccgtacttgcagagattgtactaaaaaggaaaattcctgtacttagc
atcgcagggaatcatgatagtccaacccgagttggattcggtcatcaaatacttaagggg
agcggactgtatatcgccggtgaactaactgaatatatagagccaattattcttcatgat
aagtttggagaagttcatttctatttagttccctatactgaaccatcgactgtaaaaaat
atatacgaagatgacactatatctaattttaatgaagcgatgcaaaaagtgattgagcgg
atagaacaaaatatggacaaatctaaacgtcaggtatttattggacatgcttttgtgaca
cctcatggagaaatggaagaaaatacgagtgattcagaaagaccattatcaatcggtggc
tcagaatatgtcagtgcagagcatttcaaaccatttcattatacagcattaggacatttg
cataaggcgcattacgtattaaacgaaactattcgatattcaggctctcctttaaaatat
tcttcatccgaagcaaatcatgaaaagggttttctagttgtagaattagatgaaaaggga
caagtactcgtttcaaaaagaacattccaaccacgaagagatctacgaatagtagaaggc
acccttcaagatatattaaaacatgaagtaagcgaagattatgtttttgtacgtttactt
gatattacgccagtagtgggggctatggaacaaatacgaacggtatacccgaatgcgatg
cacgttgagcgtaaaacgatacaacaaaatataataaccggagaaaatgtaacggtacaa
agagcacagctagatgatttaagtttgtttaaagccttctacaatgaaattgtaggaacg
gagccatctgaaagtacggaaaagctattccgtgaagtactagctgaaatgttaacggat
gaacgtgaaagtaaagagatggtgatcagtaaatga
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