Lysinibacillus sp. PLM2: MTP04_33880
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Entry
MTP04_33880 CDS
T09546
Symbol
rlmCD_2
Name
(GenBank) 23S rRNA (uracil-C(5))-methyltransferase RlmCD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
lyp
Lysinibacillus sp. PLM2
Brite
KEGG Orthology (KO) [BR:
lyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lyp03009
]
MTP04_33880 (rlmCD_2)
Enzymes [BR:
lyp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
MTP04_33880 (rlmCD_2)
Ribosome biogenesis [BR:
lyp03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
MTP04_33880 (rlmCD_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
Methyltransf_25
PrmA
MTS
RrnaAD
Cons_hypoth95
TRM5-TYW2_MTfase
Methyltransf_11
Methyltransf_15
Methyltransf_32
Methyltransf_4
TPMT
N6_N4_Mtase
DOT1
Methyltransf_12
Motif
Other DBs
NCBI-ProteinID:
BDH63258
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All DBs
Position
complement(3439331..3440722)
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AA seq
463 aa
AA seq
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MATPVKKNDRRTVYIEDLTHDGNGVAKIDGYPLFIQGALPQETAEIHVLKTLKNYGFAKI
VEIIEPSPDRVKAPCIYFGKCGGCQLQHLSYEGQLKWKENMVKNVMKRIGKIDAPVLPVK
GMQDPWNYRNKSQIPFSMTETGPIAGFYKSKTHEIVDMERCLIQVSEADAMMANLKKELM
EIDVQPYNEESHNGMLRHVVVRKGRATGEVMVVLVTNKHKFPQKEAAIEVIRKLVPNVTS
IVQNVNIEKTNVILGNETYTLWGEDTIEDTIGGVRFEISARSFYQVNPVQTEVLYKQALD
YAQLTGDETVIDAYCGIGTISLFLAQKAKQVMGVEIVEQAIEDAKRNADLNGFTNTYFEA
GPAEEVIPRWYADGKEADVLVVDPPRKGCDEALLTTIIEQKPKRVVYVSCNPATLARDLR
ILEDGGYKTVEIQPVDMFPQTTHVECVALMSRVKGMTNKNCLK
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggctacacctgttaaaaaaaatgatcgaagaaccgtttatatagaagatttaactcat
gatggaaatggcgttgcgaaaatagatggctacccgttatttatccaaggagcacttcct
caggaaacagcagagattcatgtactaaagacattgaaaaactatggctttgcaaagatt
gtggaaattattgagccatcacctgatcgtgtgaaggcaccttgcatttactttggaaaa
tgtggtggttgtcagcttcagcatctttcctacgaaggacaattgaaatggaaagaaaac
atggtcaaaaatgtcatgaagcgaattgggaagattgatgcaccagtacttccagttaag
ggtatgcaagacccatggaactatcgcaacaaatctcaaattccgtttagcatgacggaa
actggcccgattgccggcttttacaaatcgaaaacccatgaaattgtcgatatggaacgc
tgtttaattcaagtgagtgaagcggatgccatgatggcgaatttgaaaaaagaactaatg
gaaattgacgtgcagccttataacgaagaatcccacaacggaatgcttcgccatgttgtt
gttcgaaaaggacgtgctactggggaagtaatggttgtgctagtaacgaataaacataaa
tttccacagaaggaagcggcaattgaagtgattcgtaaactagtaccaaatgtgacttcc
atcgtgcaaaacgtaaatattgaaaaaacaaatgtaatcctcggaaatgaaacgtataca
ttgtggggggaagacacgattgaagatacaatcggtggagttcgctttgaaatttcagct
cgctccttctatcaggtaaacccagttcaaacagaggtactgtacaagcaagcattggat
tatgcacagttaactggtgatgaaacagtgattgatgcgtattgtggaatcggaacgatc
tctttattcctcgcacaaaaagcgaagcaagtaatgggcgttgaaatcgtggagcaggcc
attgaggatgcaaaacgtaatgcggatttgaatggctttacaaacacatattttgaagca
ggtccagcagaggaagtcatcccgcgttggtatgctgatggtaaagaggcagatgtactt
gttgtcgatccaccacgcaaaggctgtgatgaagcattacttacaacgattattgaacag
aaaccaaagcgagtggtgtatgtatcatgtaacccagcaaccttagcgcgggatttacga
atattagaagatggcgggtataagacagttgagattcagcctgtggacatgttcccacag
acgacacatgtggagtgcgttgccttgatgtcaagggtaaaagggatgaccaacaaaaat
tgcctgaagtaa
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