Lysinibacillus sp. PLM2: MTP04_35040
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Entry
MTP04_35040 CDS
T09546
Symbol
groL
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
lyp
Lysinibacillus sp. PLM2
Pathway
lyp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lyp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MTP04_35040 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lyp03019
]
MTP04_35040 (groL)
03110 Chaperones and folding catalysts [BR:
lyp03110
]
MTP04_35040 (groL)
03029 Mitochondrial biogenesis [BR:
lyp03029
]
MTP04_35040 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lyp04147
]
MTP04_35040 (groL)
Enzymes [BR:
lyp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
MTP04_35040 (groL)
Messenger RNA biogenesis [BR:
lyp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
MTP04_35040 (groL)
Chaperones and folding catalysts [BR:
lyp03110
]
Heat shock proteins
HSP60 / Chaperonin
MTP04_35040 (groL)
Mitochondrial biogenesis [BR:
lyp03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
MTP04_35040 (groL)
Exosome [BR:
lyp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
MTP04_35040 (groL)
Exosomal proteins of other body fluids (saliva and urine)
MTP04_35040 (groL)
Exosomal proteins of breast cancer cells
MTP04_35040 (groL)
Exosomal proteins of colorectal cancer cells
MTP04_35040 (groL)
Exosomal proteins of bladder cancer cells
MTP04_35040 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
BDH63374
LinkDB
All DBs
Position
complement(3583367..3584992)
Genome browser
AA seq
541 aa
AA seq
DB search
MAKDIKFSEEARTLMLQGVDKLANTVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIE
LENAYENMGAKLVAEVASKTNEIAGDGTTTATVLAQAMIREGLKNVTAGANPVGIRKGMD
KAVAAALEELQVISRPVENKEAIAQVAAISAADEEVGQFIADAMERVGTDGVITIEESKG
FTTELDVVEGMQFDRGYVSHYMVTDTDKMEAVLENPYILITDKKISSIQEILPLLEQVVQ
QSRPLLIIAEDIEGEALTTLILNKLRGTFNVVAVKAPGFGDRRKAMLEDIAILTGGQVIT
SELGLDLKTAEVTSLGKAGKVVVNKDNTTIVEGAGSSDAIEGRVNQIRSQIAETTSEFDK
EKLQERLAKLAGGVAVIKVGAATETELKERKLRIEDALNSTRAAVEEGIVSGGGTALLNI
YSAVDKVLSEVEGDVATGVRIVLRALEEPVRQIANNAGLEGSIIVDRLKREEIGVGFNAA
TGEWVNMIDAGIVDPAKVTRSALQNAASVAALFLTTEAVVADIPEKNPAPAMPDMGGMGM
M
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagatattaagttctcagaagaagctcgcacgctaatgcttcaaggtgttgat
aaattagcaaacactgtaaaagtaacattagggccaaaaggtcgtaacgttgttcttgag
aaaaaatttggttctccattaattacaaatgacggtgtaacaatagcaaaagaaatcgaa
ttagaaaatgcttatgaaaatatgggtgcaaaattagttgctgaggttgcatctaaaaca
aacgaaatcgctggtgacggtacgacaactgcaactgtattagctcaagcgatgattcgt
gaaggtctaaaaaacgttacagctggtgcaaatccggtaggtattcgtaaaggtatggac
aaggctgtagctgctgcattagaagaactacaagtgatttctcgcccagtagaaaataaa
gaagcgattgcacaagttgctgcaatttctgctgctgacgaagaagtaggtcaatttatt
gctgatgcgatggaacgtgtaggtactgatggtgtaattacaatcgaagaatctaaaggc
ttcactactgaattagatgtagtagaaggtatgcaattcgaccgtggttatgtatctcac
tatatggtaactgatacagataaaatggaagcagtattagaaaatccatatattttgatt
actgataaaaaaatatcaagtatccaagagattcttccattgcttgaacaagttgttcaa
caaagccgtccgttattaatcatcgcagaggatattgaaggagaagctcttactacttta
attttaaataaactacgcggtacatttaacgtagttgctgtaaaagctcctggctttggt
gatcgtcgtaaagcgatgcttgaagatatcgcgatcttaactggtggtcaagtaattact
tcagaacttggtttagacttaaaaactgctgaagttacttcattaggtaaagcaggtaaa
gttgttgttaataaagacaacacaacaatcgtagaaggtgctggtagcagcgatgctatt
gaaggtcgagtgaaccaaattcgttctcaaattgctgaaactacatctgaattcgataaa
gaaaaattacaagaacgccttgcaaaattagctggtggtgtagcagtaatcaaagttggt
gctgcaactgaaacagaattaaaagaacgtaaacttcgtattgaagatgcattaaactca
actcgtgctgcagttgaagaaggtattgtatcaggtggtggtactgcgcttctaaacatt
tatagtgctgttgataaagtactttctgaagtagaaggcgatgtagctactggtgtacgt
atcgtattacgtgctttagaagagccagtacgtcaaattgcaaacaatgcgggtcttgaa
ggttcaattatcgttgaccgcttaaaacgtgaagaaattggtgttggattcaacgctgca
actggtgaatgggtaaacatgattgacgctggtatcgttgaccctgcaaaagtaactcgt
tcagcattacaaaacgctgcatctgtagcagctctattcttaacaactgaagcggttgta
gctgatattccagagaaaaacccagctcctgcaatgcctgatatgggcggaatgggaatg
atgtaa
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