Lysinibacillus sp. PLM2: MTP04_37670
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Entry
MTP04_37670 CDS
T09546
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
lyp
Lysinibacillus sp. PLM2
Pathway
lyp03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lyp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MTP04_37670 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lyp03021
]
MTP04_37670 (rpoA)
03400 DNA repair and recombination proteins [BR:
lyp03400
]
MTP04_37670 (rpoA)
Enzymes [BR:
lyp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MTP04_37670 (rpoA)
Transcription machinery [BR:
lyp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MTP04_37670 (rpoA)
DNA repair and recombination proteins [BR:
lyp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MTP04_37670 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
SpoIVA_ATPase
HHH_5
DUF961
PASTA
Motif
Other DBs
NCBI-ProteinID:
BDH63637
LinkDB
All DBs
Position
complement(3846704..3847648)
Genome browser
AA seq
314 aa
AA seq
DB search
MIEIEKPKIETVEISEDSKYGKFVVEPLERGYGNTLGNSLRRILLSSLPGAAVTSIQIDG
VLHEFSTVEGVVEDVASIILNIKKLALKIYSDEEKVIEIDVKGDAVVTAADITHDSDVEI
LNPDLYIATIAKNGHLRMRMYARRGRGYTPADQNKREDLPIGVIPIDSIYTPVSRVNFQV
ENTRVGQNSDFDKLSLDVWTDGSIGPKEAISLGAKILTEHLNIFVGLTNEAQTAEIMVEK
EEDQKEKVLEMTIEELDLSVRSYNCLKRAGINTVLELANKSEDDMMKVRNLGRKSLEEVK
AKLEELGLGLRKED
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaaattgaaaaaccaaagattgaaactgtggagatcagcgaagattccaaatat
ggtaagtttgttgttgaaccgcttgaacgcgggtatggaaacactttgggtaattcttta
cgtcgtatccttctatcttcactacctggagctgctgtaacatccatccaaattgatgga
gtattacatgaattctctactgttgaaggtgtagttgaagatgttgcttcaattattttg
aatatcaaaaagcttgcacttaaaatctactctgacgaagaaaaagttattgagattgat
gtgaaaggtgatgcagtagtaactgctgctgatataactcacgatagtgacgttgaaatt
ttaaatccagatctatatattgcaacaatcgcaaaaaatggtcatctgcgcatgcgcatg
tatgctcgacgtggccgtggatacactcctgctgatcaaaacaaacgtgaagatcttcct
atcggcgtgatcccgatcgactctatttacactccagtttcacgcgttaatttccaagta
gaaaacactcgtgttggtcaaaactctgacttcgataagctttcacttgatgtgtggact
gatggaagcattggtccaaaagaggcgatttcgctcggagcaaaaattttaactgagcac
cttaatatcttcgtaggattaacgaacgaagcgcaaacagctgaaatcatggtcgaaaaa
gaagaagatcaaaaagaaaaagttttagaaatgactatcgaagaacttgatctttctgtt
cgttcttacaactgtttaaaacgtgctggtatcaatacggtactagaacttgcaaacaag
tctgaagatgacatgatgaaagtgcgtaaccttggtcgtaagtcactagaagaagtaaaa
gcgaaattagaagagcttggtttaggattacgtaaagaagactaa
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