Lysinibacillus sp. PLM2: MTP04_38240
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Entry
MTP04_38240 CDS
T09546
Symbol
clpC
Name
(GenBank) negative regulator of genetic competence ClpC/MecB
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
lyp
Lysinibacillus sp. PLM2
Brite
KEGG Orthology (KO) [BR:
lyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
lyp03110
]
MTP04_38240 (clpC)
Chaperones and folding catalysts [BR:
lyp03110
]
Heat shock proteins
HSP100
MTP04_38240 (clpC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
Clp_N
ClpB_D2-small
AAA
AAA_5
Sigma54_activat
AAA_16
AAA_22
AAA_18
nSTAND3
UVR
IstB_IS21
AAA_7
TniB
AAA_14
AAA_28
RuvB_N
Mg_chelatase
ATPase_2
Zeta_toxin
AAA_23
AAA_3
NACHT
Torsin
Sigma54_activ_2
AAA_25
NBD_SMAX1
DNA_pol3_delta2
DUF7104
DUF6005
Motif
Other DBs
NCBI-ProteinID:
BDH63694
LinkDB
All DBs
Position
complement(3894363..3896804)
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AA seq
813 aa
AA seq
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MMFNRFTQRAQKVLQLAQEEAIRWKHESIGTEHILLGLIREGGGIAAKALEAIDVSPQMI
ESGIEELVGKGTKDVGPIVHYTPRAKKVIELSVDESRKLGHAYIGTEHILLALIREGEGV
AARVLSNAGVSLNKARQQVLLLLGNNDTTQSGANPTQSVNTPTLDGLARDLTAIAREGSL
DPVIGRSKEITRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPEILRDKRV
MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNVILFIDELHTLIGAGGAEGAIDASNI
LKPSLARGELQCIGATTLDEYRKYIEKDAALERRFQPIQVDEPSVEETIQIINGLRDRYE
AHHRVKITDEAVEAAAKLSDRYISDRFLPDKAIDLIDEAGSKVRLRSFNVPPNLKALEDK
LENVRNEKNAAVSSQEFEKAAALRDTEQKIKDELEQTKKTWKEKQGKEESKVTVDDIAMV
VSMWTGIPVSKIAQEESEKLLNLEEELHKRVVGQTEAVEAISRAIRRARAGLKDPKRPIG
SFIFLGPTGVGKTELARALAEVMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGFDEG
GQLTEKVRRKPYSVVLFDEIEKAHPDVFNILLQVLDDGRLTDSKGRKVDFRNTVVIMTSN
VGAEALKYRKNLGFGVGDTSDKYKDMKGTMLEELKKAFRPEFLNRIDEMIVFHSLEKDEL
KEIISLMATSLTKRLKEQDIELELTDAALEKIADEGYDPQYGARPLRRSLQKHVEDRLSE
ELLKGNVSKGQQVVFDYVDGEFVIRQKDTVNAI
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atgatgtttaatcgttttacacagcgagcacaaaaagtattacaacttgcacaagaagaa
gctatccgatggaagcacgaatcgattggaactgaacatatacttcttggccttattcgt
gaaggtgggggaattgcagcaaaggctttagaggcaattgatgtaagcccacaaatgatt
gagtcgggaatcgaggagctagttggtaaaggcacaaaagacgttggcccaatcgttcat
tatacacctcgagctaaaaaggtaatcgagctgtcagtagatgaatctcgtaagcttggc
cacgcatacattggaactgaacatatattattagccttaatccgtgaaggtgaaggtgta
gcggctcgagtactttcaaatgctggtgtaagtttaaataaagcccgtcagcaagtatta
ctcctactaggaaataatgatacaacgcaaagtggagcaaatccaactcaatcggtaaat
actccaacgctagatggtttagctcgtgacttaaccgcaattgcgagagaaggctcttta
gatcctgttattggacgtagtaaagaaatcacacgagtgattgaggtattatctcgtcgt
acaaaaaacaacccagtattaatcggggagcctggcgtaggtaaaacggctattgcggaa
gggcttgctcaacaaatcgttaataacgaagtgcccgaaatcttacgtgacaaacgtgtc
atgacgcttgatatgggtacggttgtagcaggaacaaaataccgtggtgagtttgaagat
cgtttgaaaaaggtaatggatgaaattcgtcaagcaggcaatgtcattttattcattgat
gaattgcatacattaattggagcgggtggtgcagaaggtgcgatcgatgcatccaatatt
ttaaaaccatccttagctcgtggagaattacaatgtattggtgcaacaacgctagatgag
tatcgtaaatacattgaaaaagatgcagctttagagcgtcgattccaaccaatccaggtt
gatgaaccatcagtagaagaaacaattcaaattattaatggtttacgtgaccgttatgaa
gcgcatcaccgtgtaaaaattactgatgaagccgttgaagcggcagcaaaattatcagat
cgttatatctcagatcgcttcttaccagataaagcgattgacttaatcgatgaagctggc
tctaaagttcgcctacgttcatttaacgtaccgccaaacttaaaagcgttggaagacaaa
ttagaaaatgttcgtaacgaaaaaaatgcagcagtatcaagtcaagaatttgaaaaagcg
gctgcacttcgtgatactgaacaaaaaattaaagatgagctagagcaaacgaaaaaaaca
tggaaagaaaaacaagggaaagaggaatcgaaagtcacagttgatgatatcgctatggtc
gtatcaatgtggactggaattccggtttcaaaaattgctcaagaagaatctgaaaaactg
cttaacttagaagaagaattacacaaacgtgttgtcgggcaaacagaagcagtagaagca
atttcacgtgcaatacgtcgtgctcgtgcaggtttgaaagatccaaaacgtccaatcggt
tcatttattttccttgggccaacaggtgttggtaaaacagagcttgctcgtgctttagct
gaagtgatgtttggcgatgaagatgcaatgattcgaattgacatgtctgaatacatggag
aaacattcaacttctcgtctagttggttcacctccaggctatgttgggtttgatgaaggt
ggtcaactaacagaaaaagtacgtcgcaaaccatattcagttgtgttatttgatgaaatt
gaaaaagcgcacccagatgtgttcaatattctgctacaagtattggatgacggacgttta
actgattcaaaaggacgtaaagtagacttccgtaacacagttgttattatgacgtcaaat
gtaggtgcagaagccttgaaatatcgtaaaaatcttggctttggtgttggtgatacctct
gacaaatataaagatatgaaagggactatgcttgaagaattgaaaaaagcattccgtcca
gaattcttaaaccgtatcgatgaaatgattgtcttccattcattagaaaaagatgaatta
aaagaaattatttctctaatggcgacatcattaacaaaacgtttgaaagagcaagatatt
gaattagagcttacagatgctgctcttgaaaaaattgcagacgaaggctacgatcctcaa
tatggtgctcgtccattgcgccgctctttacaaaaacacgttgaagaccgcctttctgaa
gaactgttaaaaggaaatgtttcaaaaggtcagcaagtagtctttgattatgtagatggt
gagtttgttattcgccaaaaagatactgtgaacgcaatctaa
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