Lysinibacillus sp. PLM2: MTP04_39280
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Entry
MTP04_39280 CDS
T09546
Symbol
ssb
Name
(GenBank) single-stranded DNA-binding protein
KO
K03111
single-strand DNA-binding protein
Organism
lyp
Lysinibacillus sp. PLM2
Pathway
lyp03030
DNA replication
lyp03430
Mismatch repair
lyp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lyp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MTP04_39280 (ssb)
03430 Mismatch repair
MTP04_39280 (ssb)
03440 Homologous recombination
MTP04_39280 (ssb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lyp03032
]
MTP04_39280 (ssb)
03400 DNA repair and recombination proteins [BR:
lyp03400
]
MTP04_39280 (ssb)
03029 Mitochondrial biogenesis [BR:
lyp03029
]
MTP04_39280 (ssb)
DNA replication proteins [BR:
lyp03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
MTP04_39280 (ssb)
DNA repair and recombination proteins [BR:
lyp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
MTP04_39280 (ssb)
TLS (translesion DNA synthesis) factors
Other SOS response factors
MTP04_39280 (ssb)
Mitochondrial biogenesis [BR:
lyp03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Other Mitochondrial DNA replication factors
MTP04_39280 (ssb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSB
SSB_1
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
BDH63798
LinkDB
All DBs
Position
complement(3999654..4000193)
Genome browser
AA seq
179 aa
AA seq
DB search
MINRVVLVGRLTKDPELRYTPSGIPMTRFTVAVNRAFSNQSGEREADFISCVAWRKQAEN
LANFMKKGSLIGVDGRIQTGSFEGQDGKRVYTTDVVADSVQFLEPRSGGASQNQQFGAQP
SYGNQPAYSTSQPQYGNQQQDPFGSYQQPQNQQNYTRVDEDPFASSKGPIEVSEDDLPF
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgattaaccgtgttgtattagttggaagactaacaaaggatccagagcttcgctatacg
ccaagtggtattccaatgactcgttttacagtagctgtaaatagagcattttcgaatcaa
tcaggtgaacgtgaagctgatttcataagctgtgtggcatggagaaaacaggctgaaaac
ttagcaaacttcatgaaaaaagggagtttgattggtgttgacggtcgtattcaaacaggc
agttttgaagggcaagacggcaaacgtgtttatacaacagatgtagtagcagattctgtg
cagttcttagaaccgcgcagtggaggagcttctcaaaaccaacagtttggagcccagcca
tcatatggaaatcagcctgcatacagtacaagccaaccacagtatggaaatcaacagcag
gatccgtttggttcttatcaacaacctcaaaatcagcaaaattatacacgtgtagatgag
gatccatttgcttcaagcaaaggtccaatagaagtttctgaggatgacttaccattctaa
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integrated database retrieval system
