Lysinibacillus sp. Ag94: MY533_01150
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Entry
MY533_01150 CDS
T10411
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lyq Lysinibacillus sp. Ag94
Pathway
lyq03420
Nucleotide excision repair
lyq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lyq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MY533_01150
03430 Mismatch repair
MY533_01150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lyq03400
]
MY533_01150
Enzymes [BR:
lyq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MY533_01150
DNA repair and recombination proteins [BR:
lyq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MY533_01150
MMR (mismatch excision repair)
Other MMR factors
MY533_01150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
UvrD_C_2
UvrD-helicase
Viral_helicase1
AAA_19
DEAD
AAA_30
SLFN-g3_helicase
DUF6466
ResIII
NACHT
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
UPW83516
LinkDB
All DBs
Position
complement(247782..250022)
Genome browser
AA seq
746 aa
AA seq
DB search
MTAQHPDFQAEVKRLAYTKNYMQQILNESQRGLQSAQENIRKSMADLDYLDSSLGYINIL
ANARFFEMARNQKEGLEAIQKKPYFARIHFQKTGDPEEFLYIGKTSLFHRETHEPIIVDW
RSPVANVYYDGRLGDMEYDVRGEIHKGHLFAKRQYKINDGELLDLRDIDLTTNDELLQEA
LAGKADVRLTEIVSTIQKEQNEIIRAHLRQPIIVQGAAGSGKTTIALHRISYFLYTMGEH
FNPEQLMILAPNKLFIDYIGDVLPELGVDKICQTTFSDYVLAATKLKLKLQNPNEQLESL
VAGEPQQVASWISEMKGSLYYRDVIERYVQKIEQEIANQFEDVFIEKYCIMRASHLKKLF
LYEFSYMPIEKRLAHIKKVLASHARQKKQAILNTLHKKYDEALGRALDGFRDDDKRRRVV
TKFIDERDERIPAIEKEAKSTATVYMRRFAKHNIKTLYRTLLTNAELLAELAPEWHYLEQ
QQFLQAHTKEQWALEDLAALYYLQARIKGIPDEWKMRVVFIDEVQDYSLFQLAALKTGLE
TDMFTMVGDLAQGIHSYRSLTAWEPVQNLFPRASFRTLQKSYRTTIEIMEVANKVLAQMD
EQLPLVEPVVRHGNVPTFIQAQSFDALQIKEIFEAIRANGHHSVALICKTTAEAKTMQQA
LQDEKIASQLLTENESINQQLLLVVPSHLAKGLEFDAVIVAAFETPFYDTKVDRKLLYVA
LTRAMHELYLIGPTKNTFLLENEQTS
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atgactgcacaacatccagattttcaggctgaagtgaagcgactagcttacactaaaaat
tacatgcagcaaattttaaatgaatcacaaagaggtttgcaatctgctcaggagaatatt
cgtaaatcgatggcagatcttgattatttagattcaagtttgggctacattaatatctta
gcaaatgctcgtttctttgaaatggcccgaaaccaaaaggaaggcttagaggctattcaa
aaaaagccttactttgcccgaattcatttccaaaagacaggggatcctgaagaatttctt
tatatcggaaaaacgtctttgtttcatcgagaaacccatgagcctataatagtcgattgg
cgttcaccggttgcaaacgtctattatgatggtcgccttggggatatggaatatgatgtt
cgtggagaaatccataagggacatctatttgccaaacgccaatataaaattaatgatggt
gaattgctcgatttacgggatattgatttaacaacaaatgatgaattactgcaagaagct
ttagctggaaaagcagatgtgcgtttaacagaaatcgtctccactattcaaaaggagcaa
aacgaaattatacgagcacatcttcgtcagccaattatcgtacaaggtgctgctggtagt
ggaaaaacaacaattgccctacaccgaatatcttacttcctttacacgatgggcgagcat
tttaaccctgagcagctcatgattttagcaccaaataagttatttatcgattatattggt
gatgttttaccagagcttggtgttgataaaatttgccaaacaaccttttccgattacgtt
ctagccgcgacgaaacttaaattgaaacttcaaaacccaaatgagcagttagaatctctt
gttgcaggagaaccccaacaggtagcttcgtggatatctgaaatgaagggctcgctttat
tatcgagatgtaatagaacgatacgttcaaaaaatagagcaggaaattgccaaccaattt
gaggatgttttcatagaaaaatactgcattatgcgtgcctcccatttaaagaagctattt
ttatatgaattttcttatatgccaattgaaaaacgactagcacatattaaaaaagtgcta
gcaagccatgctcgtcaaaagaaacaggctattttaaatacacttcataaaaaatatgat
gaagcactaggcagagcacttgatggatttcgtgatgatgacaaacggcgtcgggttgtc
acgaagtttattgatgaacgtgatgaacgcattcctgccattgaaaaagaggcaaaatca
acagcaacagtttatatgcgacgctttgctaaacataacatcaagactctctatcgtact
ctcctaacaaatgctgagcttttagcagagcttgctccagaatggcattatcttgagcaa
cagcaatttttacaggcacatactaaagaacaatgggcgcttgaagatttagctgcactg
tattatttacaagctcgtataaagggtattcctgatgaatggaaaatgcgagtcgttttc
atcgatgaagtacaagactatagtttatttcagcttgctgctttaaaaactggccttgaa
acagatatgtttacaatggttggtgatttagcacaaggaattcacagctatcgttctctt
actgcctgggaacctgtccaaaatctatttcctagagcaagctttagaacactgcaaaaa
agctatcgaacaacaatcgaaattatggaggtcgctaacaaagtcttagctcaaatggat
gaacagcttccattagtagagccagtagttcgacatggtaatgtccctacctttattcaa
gctcaatcatttgatgccctgcaaataaaggaaatttttgaagccattcgcgccaatgga
catcattccgttgctttaatttgcaaaacgaccgcagaggcaaaaacaatgcagcaagca
ttacaggacgaaaaaattgcttctcagcttcttactgaaaatgaatccatcaatcagcaa
ttattgctcgttgttccgagtcatttagcaaagggccttgaatttgatgctgtgatcgta
gctgccttcgaaacacccttctacgatacgaaggtcgatcgcaagctactttatgttgca
ctcactcgagccatgcacgagctttatttaattggtccaacaaaaaatacatttctatta
gaaaatgaacagacatcataa
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