Lysinibacillus sp. Ag94: MY533_01865
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Entry
MY533_01865 CDS
T10411
Symbol
rpoE
Name
(GenBank) DNA-directed RNA polymerase subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
lyq Lysinibacillus sp. Ag94
Pathway
lyq03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lyq00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MY533_01865 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lyq03021
]
MY533_01865 (rpoE)
03400 DNA repair and recombination proteins [BR:
lyq03400
]
MY533_01865 (rpoE)
Transcription machinery [BR:
lyq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MY533_01865 (rpoE)
DNA repair and recombination proteins [BR:
lyq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MY533_01865 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
TPR_20
Motif
Other DBs
NCBI-ProteinID:
UPW83647
LinkDB
All DBs
Position
415057..415593
Genome browser
AA seq
178 aa
AA seq
DB search
MNFREMTKEQLTEESLINLAYAILNEKRASVSFNDLLTIIQELVGYSDEEMKARLLQFYT
DMNVDGRFLFNQETGWGLREWYKVEQIEEETAPSVKTHKKKSKAAVEDEDDLDEDLDEED
IDFDEDYEEFVEDEDDLDEEDDKEDIDFDEEDIEDIDEEIDEDFTDEDEEEFEEEDEI
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
atgaattttcgtgaaatgacaaaagaacaattaacggaagaatcgttaattaacttagcg
tacgcaattttaaatgaaaaacgtgcctcagtgtcttttaatgacttattaacaattatt
caagagcttgtaggctatagtgatgaagaaatgaaagctcgcctgctacaattttacaca
gatatgaatgtagatggtcgcttcttatttaatcaggaaactggctggggcttacgtgaa
tggtataaagttgaacagattgaagaagaaacagctccttctgttaaaactcataagaaa
aaatctaaagcagccgttgaagatgaagatgatttagatgaagatctagatgaagaagat
attgacttcgatgaagattatgaagaattcgttgaagatgaagatgatctagatgaagaa
gatgataaagaagatatcgattttgatgaagaagatatagaggacatcgatgaagaaatc
gacgaggactttactgatgaagatgaagaagaatttgaagaagaggacgaaatctaa
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