KEGG   Lysinibacillus sp. Ag94: MY533_03145
Entry
MY533_03145       CDS       T10411                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
lyq  Lysinibacillus sp. Ag94
Pathway
lyq00010  Glycolysis / Gluconeogenesis
lyq00020  Citrate cycle (TCA cycle)
lyq00260  Glycine, serine and threonine metabolism
lyq00280  Valine, leucine and isoleucine degradation
lyq00310  Lysine degradation
lyq00380  Tryptophan metabolism
lyq00620  Pyruvate metabolism
lyq00630  Glyoxylate and dicarboxylate metabolism
lyq00640  Propanoate metabolism
lyq00670  One carbon pool by folate
lyq00785  Lipoic acid metabolism
lyq01100  Metabolic pathways
lyq01110  Biosynthesis of secondary metabolites
lyq01120  Microbial metabolism in diverse environments
lyq01200  Carbon metabolism
lyq01210  2-Oxocarboxylic acid metabolism
lyq01240  Biosynthesis of cofactors
Module
lyq_M00009  Citrate cycle (TCA cycle, Krebs cycle)
lyq_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
lyq_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
lyq_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:lyq00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    MY533_03145 (lpdA)
   00020 Citrate cycle (TCA cycle)
    MY533_03145 (lpdA)
   00620 Pyruvate metabolism
    MY533_03145 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    MY533_03145 (lpdA)
   00640 Propanoate metabolism
    MY533_03145 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    MY533_03145 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    MY533_03145 (lpdA)
   00310 Lysine degradation
    MY533_03145 (lpdA)
   00380 Tryptophan metabolism
    MY533_03145 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    MY533_03145 (lpdA)
   00670 One carbon pool by folate
    MY533_03145 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lyq04147]
    MY533_03145 (lpdA)
Enzymes [BR:lyq01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     MY533_03145 (lpdA)
Exosome [BR:lyq04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   MY533_03145 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox_3 Pyr_redox GIDA FAD_oxidored DAO NAD_binding_8 HI0933_like FAD_binding_2 3HCDH_N Thi4 AlaDh_PNT_C FAD_binding_3 Lys_Orn_oxgnase NAD_binding_7 Trp_halogenase NAD_binding_9 2-Hacid_dh_C
Other DBs
NCBI-ProteinID: UPW83886
LinkDB
Position
715714..717051
AA seq 445 aa
MEKFDIAIIGAGPGGYIAAIHAAKSGKKVALVERDKVGGACYNVGCIPSKILLEHSKLIQ
EIKRGNDWGIETSTVNVNFPKLMKRKDAIIDELLTNIESYILSNQITFYRGEAAVSNDLM
VTVGDEVFTATDIILAMGSKPFVPPFKGIEASSYYTTDTFFDMTELPKQLTIIGGGVIAV
EMAFSLAPLGTKVTVLNHSEDILQTEEPDARPLIREKMKKLNIELVTDFQFEHFNGNEIH
TSKGIYTYENLLFATGRRPNTKIAQQLGLAFEGRSIAVNEHLETSQPHIYAIGDLVGGFQ
LAHSASAEGIYVVDHILGNKPARIDQALIPRCVYTHPEIATFGLLEEQVNEPYKVTKMPL
HTNSKALMEGNTVGFIKLIATEKEGRILGACVVADGATEMLNAILATKNAGGTAHTLANM
IFPHPTVSEHIGDAAKAIFDKAIHQ
NT seq 1338 nt   +upstreamnt  +downstreamnt
gtggaaaaatttgatattgcaattattggtgcaggacctgggggctatatagcagccatt
catgcagcaaaaagtggcaagaaggtcgctttagtagagcgcgataaagtaggaggagcc
tgctataatgtcggctgtattccttcgaaaatattgttggagcatagtaagctcattcaa
gaaataaaacgtggtaatgattggggtattgaaacttctacagtaaatgtgaattttcca
aaattgatgaaacgtaaggatgctattattgacgagcttttaacgaatattgagagctat
attttgagcaatcaaattaccttttatcgaggagaagcggcagtatctaatgatttaatg
gtaacagttggtgatgaggtctttactgcaacggatatcattttagcaatgggaagtaaa
ccatttgtaccaccttttaaaggtatagaggcttcttcctactatacaacggataccttt
ttcgatatgacagagctaccaaagcagttaacaattataggcggaggcgttattgcagta
gaaatggcatttagtttagcaccgctaggaacaaaggtgacggtgctgaatcatagtgaa
gatattttacagacagaagagccagatgcacgaccactaattcgtgaaaagatgaaaaag
cttaatattgagcttgtgacagattttcaatttgagcattttaatggcaatgaaattcat
acatctaaaggcatttatacatatgaaaatcttttgtttgcaacgggtcgacgcccgaat
acaaaaatagcccagcagctaggtttagccttcgaaggtcgatcgattgctgtcaatgag
catcttgaaacaagtcagccacatatttatgctataggtgacttagttggtggtttccag
ctagctcattcagcgagtgcagagggaatttatgttgtcgaccatattctggggaataaa
ccggcacgaattgatcaagctttgattcctcgctgtgtttatacacatcctgaaattgca
acttttggattactggaagaacaggttaacgaaccttataaggtgacgaaaatgccttta
catacaaactctaaggcattaatggagggcaatacagtgggctttataaagctcattgcg
acggaaaaagaaggacgcattttaggagcttgtgttgttgctgatggggcaacagaaatg
ttaaatgctattttagctactaaaaatgctggtggtacggcccatactcttgcaaatatg
atttttccacatcctacagtgtcagagcatataggggatgctgcaaaagctatttttgac
aaagccattcaccaataa

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