KEGG   Lysinibacillus sp. Ag94: MY533_04855
Entry
MY533_04855       CDS       T10411                                 
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
lyq  Lysinibacillus sp. Ag94
Brite
KEGG Orthology (KO) [BR:lyq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:lyq03016]
    MY533_04855 (truB)
Enzymes [BR:lyq01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     MY533_04855 (truB)
Transfer RNA biogenesis [BR:lyq03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    MY533_04855 (truB)
 Prokaryotic type
    MY533_04855 (truB)
SSDB
Motif
Pfam: TruB_N TruB_C_2
Other DBs
NCBI-ProteinID: UPW84205
LinkDB
Position
1093856..1094767
AA seq 303 aa
MNGILPLWKERGMTSHDCVFKLRKILRTKKVGHTGTLDPGVEGVLPICIGQATRIAEYLT
DAGKTYEAVISIGRTTTTEDAEGETVEQDRTAKKFTRTQLQEVLASLTGVIQQTPPMFSA
VKVNGKRLYEYARKGEIVERPTRQVTIYALELLDDVEIYEGQEITFPVRIACSKGTYIRT
LAVQIGAALGYPAHMKELVRTASGTFTQEKCFTLAQVAELMESEQIDTCILPVEYALTDY
PYMEITSANEKEIFNGQVLPADALLKIHDKIVFGISGKAIAVYHAHPTKEGFMKPHKMFP
TIE
NT seq 912 nt   +upstreamnt  +downstreamnt
atgaacggtattttaccgctttggaaagaacgtggcatgacaagtcatgattgcgttttt
aaattacgaaaaattttacgtactaaaaaagttggccatacaggcacacttgatccaggt
gttgagggagttcttcccatttgtattggtcaagcaacacgcatcgcagaatacttaact
gatgcagggaaaacctatgaagctgttatttcaattggccgtacaacgacaacggaggat
gcagaaggggaaacggttgagcaagatagaacggctaaaaagttcacacgtactcaattg
caagaggttttagcatcgctaacaggtgttattcaacaaacgccaccgatgttttcagct
gtcaaagtaaatggtaaacgtctctatgaatatgctcgaaaaggcgaaattgtcgaaaga
cctacacgtcaagttaccatttatgcattagaactactagatgatgtagaaatatatgaa
gggcaagaaattacattcccagtacgtatagcgtgtagtaaagggacgtatattcgaaca
ctagctgtgcaaatcggagcggcacttggctatccagcacacatgaaagagctcgtacgc
acagcctcaggtacatttacgcaagagaaatgctttacgttggcacaagttgctgaactg
atggaaagtgaacaaattgatacatgcattttaccagtggagtatgcattaacagattat
ccatatatggagatcacttccgcaaacgaaaaagaaattttcaatggacaagtgcttccc
gcagatgcattattaaagatacatgataaaattgtttttggaattagtgggaaagcaatt
gcggtctatcatgcccatcctacaaaggaagggtttatgaagccacataagatgtttccg
acgatagagtag

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