Lysinibacillus sp. Ag94: MY533_05895
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Entry
MY533_05895 CDS
T10411
Name
(GenBank) sigma 54-interacting transcriptional regulator
Organism
lyq Lysinibacillus sp. Ag94
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_50
PAS_9
AAA_2
AAA_5
HTH_8
NUMOD1
PAS_4
HTH_28
HTH_1
PAS
DUF2381
AAA_3
HTH_Tnp_ISL3
CCDC-167
PoNi_N
Motif
Other DBs
NCBI-ProteinID:
UPW84402
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Position
1320558..1322204
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AA seq
548 aa
AA seq
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MSITQLHKEEHFFIVKNDEVIIKSDIQIELLEKIIKKYSKGIETFDVEGYCIHVIETSQG
RLFHVKPSMQYSYIDFMNSLSVKVLNSISDGVTVCDSDGKIIFQNDIDIEIVGIDLMGRY
AKDVIAEGLMSDSISMKVIESKEKVTILQTFINGKCFLVSGKPIFDEYGELQYVVAITRD
MTQLKLLEKEVKKLEVQNENFKNKLHALHNKENTKSSLIAVSSAMMQVVERVMRVAEVDS
TVLIGGESGVGKEEITKLIHANSRRHDKQILTINCSAIPENLLESELFGYEAGAFTGASR
GGKAGLFEIASSGTVFLDEIGEMPLLLQAKLLRVLQESEVQRLGSGKPIPIDVRIIAATN
RNLAEMVRQGNFREDLYYRLNIIPIEIPPLRQRRQDIIPLVNHFLAIIEDKYGIHRTIES
SAMKILESYDWPGNVRQLKNMVERICLLATQPEITAFIVQQELDSNLPITRDSENPLEIQ
SIQEQVVTPRFSGTLKEQVAGFEKQIIKEALSTYPSIRQAAKSLGCDQSTLVRKIQKFQL
TKQISYED
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgtcgataactcaactacataaagaggagcatttttttattgtaaaaaatgatgaggta
ataattaaaagtgatattcaaatagagcttcttgaaaaaataataaaaaaatatagtaaa
ggaatagaaacctttgatgtggaaggctattgtattcatgtaatagagacttcacaaggt
cgcttattccatgtcaaaccatccatgcagtatagctatatagactttatgaactcattg
tcagttaaagttttaaactccatatccgatggcgttacagtctgtgatagcgatggcaaa
attatatttcaaaatgatatagatatcgaaattgtgggcattgatttaatggggagatat
gcaaaagacgtcattgctgaaggattaatgagtgattccatttcgatgaaagtcattgaa
tcaaaagaaaaagtaacgattttgcagacgttcattaatggcaaatgctttttagtttct
ggaaagccgatatttgatgaatacggcgaattacaatatgtagttgctattactcgtgat
atgacacaattaaagctgttagagaaagaagtaaaaaaattagaagttcaaaacgagaac
tttaaaaataaactacatgccttacataataaagaaaacacaaaaagtagtttaatcgct
gtatcttcagcaatgatgcaggttgtagaacgtgttatgagagttgcagaggtagattct
actgtattaattggtggtgaatcgggcgtaggtaaagaagagataacaaagcttattcac
gcaaatagccgccgtcatgataagcaaattttaacgattaactgtagtgcaatcccagag
aatttattagaatctgaacttttcggctatgaagctggagcctttacgggagcgtcaaga
ggtggtaaggcagggttatttgagattgcgtcaagtggcacagtgtttttagatgaaatt
ggagagatgcccttgctactacaggcgaaattattacgtgtgctccaagaatcagaggta
cagcgtctaggaagcggaaagcctattccgatcgatgtacgcattattgctgcgacaaat
cgcaatctagcggagatggtgaggcaaggtaattttcgtgaggatttatattatcgttta
aatattatacctattgaaattcctcctttaagacaacgtcgccaagatatcattccatta
gtcaaccattttttggctattattgaagataaatatgggatccatcggacaattgagtca
tcggcaatgaaaatattagaatcttatgattggccaggcaatgtacgtcaacttaaaaac
atggtggagcgtatttgcttactagcaacgcagccagaaataaccgcatttattgtgcaa
caagagctagatagtaacctacctattacacgtgattcagaaaatccactagaaatacaa
agtattcaggaacaggttgtaactccgaggtttagtggtactttaaaggagcaagtagct
gggtttgaaaagcagattattaaagaagctctatctacctatccaagtattaggcaagct
gctaaatcacttggatgtgatcagtcaacattagtacgtaaaatacaaaagttccaatta
acgaaacaaatttcatatgaggattaa
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