Lysinibacillus sp. Ag94: MY533_06425
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Entry
MY533_06425 CDS
T10411
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lyq Lysinibacillus sp. Ag94
Pathway
lyq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lyq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MY533_06425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lyq03019
]
MY533_06425
03400 DNA repair and recombination proteins [BR:
lyq03400
]
MY533_06425
Enzymes [BR:
lyq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MY533_06425
Messenger RNA biogenesis [BR:
lyq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MY533_06425
DNA repair and recombination proteins [BR:
lyq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MY533_06425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
SNF2-rel_dom
AAA_22
DUF5637
HEM4
Motif
Other DBs
NCBI-ProteinID:
UPW84495
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All DBs
Position
1429622..1431064
Genome browser
AA seq
480 aa
AA seq
DB search
MELEQTLVKYFGYTTFRPGQKEVIEAILEEKDVIALLPTGMGKSLCYQLSGYILQKPVLI
VSPLLSLMQDQVEELKRFGEKRVVALNSFLTVSEKRYVLHFLEQYRFIFTSPEMLLQQQV
QDKLSQMQLGLIVVDEAHCISQWGFDFRPDYLRIGQWFSQVNRPPVLALSATATNKVIND
IRDTLSLHTPFEFLYNVDRPNIHLGRVVFEDRADKTHWIMQHIKETAGPGILYLSSRKRA
EQYSAALIQAGVRVAAYHAGYDAEDRQFIQQQFIDGELDWIVATNAFGMGINKSNIRQVI
HETLPANVENYMQEIGRAGRDGQSALAILLYSDGDEELAKFVVTGDLPTAGHVDRYQELL
NQHVHPSQMLKNGEVSETAFRVLDYWLQQETVEQVKVRLNHLVLEKYRAVDKMHKITQTK
DCIRTQLVGYFGQKLLKKPENCCENCGIHYDEINKVRLKEEKKIEMMPWKSRLKQLLMGC
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggaacttgaacaaacgttagtaaagtattttggctatacaacatttcgtccaggccag
aaagaggttattgaagcaatcttagaagaaaaagatgttattgctttattaccaactgga
atgggaaagtcactttgttaccaactatcaggatatatcttgcagaagccagtattaatt
gtttctccgctgctttctctaatgcaggaccaggtagaggagttaaaacgctttggtgaa
aagagggtagttgctttaaattcatttttaaccgtaagtgaaaaacgatatgtattacat
tttttagagcagtatcgttttatatttacgtcaccggagatgcttttacagcagcaagtt
caagacaagctttcacaaatgcagctaggtcttatcgttgtggacgaggcacattgtatt
tctcagtggggctttgattttcggccagattatttacgaattggacaatggttttcacaa
gtaaatcgtccaccggttttagcattatcagcaactgcgacgaataaagtaatcaatgac
atacgagatacactgtcgctacatacaccatttgagtttttgtacaatgtggatcggcct
aatattcatcttgggcgtgtcgtatttgaggatagggcagataaaacacactggattatg
caacatattaaagagacggcaggaccgggtatattatatttgtcctcgcgtaagcgtgct
gaacaatatagcgcagcgcttatacaggctggtgtacgtgtagcagcttatcatgcaggc
tatgatgctgaggaccgtcagtttattcagcaacagtttattgacggggagctcgactgg
attgtggcgacgaatgcttttggaatgggtatcaataagtcaaatattcgtcaggttatc
catgaaacgcttcctgctaatgtagaaaactacatgcaggaaattggccgcgcagggcgt
gatggtcaatcagcgctcgcaattttactttatagtgatggtgatgaggaacttgcgaaa
tttgttgtaacaggcgatttgccaacagctggtcatgttgatcgttatcaggaactacta
aatcaacatgtgcatccttcccaaatgttgaaaaatggagaggtaagtgaaaccgctttt
cgtgtgcttgattactggctacaacaagaaacggtggaacaagtgaaagtacgtttaaat
catttagtactggaaaagtatcgagctgtcgataaaatgcataaaattactcagacaaaa
gactgtattcgcacacagctagtcgggtattttgggcaaaaattgctgaaaaaaccagaa
aactgttgtgaaaattgtggaatccattatgatgaaatcaataaggtacgcttaaaagaa
gagaagaaaatagaaatgatgccatggaaaagtcggctaaagcagctcttaatgggttgt
taa
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