Lysinibacillus sp. Ag94: MY533_10575
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Entry
MY533_10575 CDS
T10411
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lyq Lysinibacillus sp. Ag94
Pathway
lyq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lyq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MY533_10575 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lyq03019
]
MY533_10575 (recQ)
03400 DNA repair and recombination proteins [BR:
lyq03400
]
MY533_10575 (recQ)
Enzymes [BR:
lyq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MY533_10575 (recQ)
Messenger RNA biogenesis [BR:
lyq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MY533_10575 (recQ)
DNA repair and recombination proteins [BR:
lyq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MY533_10575 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
UPW85261
LinkDB
All DBs
Position
2287798..2289567
Genome browser
AA seq
589 aa
AA seq
DB search
MEQARQMLQHHFGYDSFRNGQEPIIEQTLRGQSSLCVMPTGGGKSICYQIPALMLDGLTV
VISPLISLMQDQVEALRAANIPAAYINSTLTVQEVNETMQLASAGYLKLLYIAPERLESA
TFLQVLSNLSVPLLAVDEAHCISQWGHDFRPSYRAIQKLFTLWPQKPTVLALTATATPAV
CDDIRQLLGIDEQSTVITGFSRDNLSFSVLIGENKERYIKNYLVKNKNEAGIIYAATRKA
VDAIYELLSRSGEAVAKYHAGLPEDKRMSEQERFLKDEARIMVATNAFGMGIDKSNVRFV
IHYQMPRNMESYYQEAGRAGRDGLPSACILLYASGDVQTQRFLIEQTQDETRIAQELAKL
QTMVDYCHTEGCLQNAILTYFAEKAGAPCSRCSNCNDGREVKDVTVDAQKVLACVVRMGQ
KFGKTMVAQVLIGSKNQKVSEFGFARLSTYGILKGQYSSKDVSTFIEFLIAEGVLAVKHG
TFPTIYVSEEGKEVLLGNRQVMRKEAVTVRKLVDNDPLFEHLRLLRKEIADEEQVPPFVV
FSDKTLRDLCDKKPTELEDLRHVSGIGEVKFEKYGKRFFDALHSFLKTT
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggagcaagcaagacaaatgctacaacatcattttggctatgattcatttcgcaatgga
caagaaccaattattgaacaaacattacgaggtcaatcaagtctttgtgtgatgccaact
ggcggaggtaaatcaatttgctatcaaattccggcacttatgctagatggccttacagtc
gtcatatctccgttaatttctcttatgcaagatcaggtagaagcattacgtgctgcaaat
attccggccgcgtatataaatagtactttaaccgtgcaagaagtgaacgaaacaatgcag
ctagcgagtgcaggttatttaaagcttctttatatagcacctgagcgattagagagtgca
acatttttacaggtattatcgaatttatcagtacctttacttgcagtggatgaagcacat
tgtatttctcagtgggggcatgattttagaccaagttaccgagcaatccaaaaattattt
acattatggccgcaaaagccaactgtcttagcacttacagcaacagctacaccggctgta
tgtgacgatattagacaattattagggattgatgagcaatcgacggtgattaccggcttt
tcacgcgacaatttatctttctcggtgttaattggtgaaaacaaagaacgttatattaaa
aactatttagtgaaaaataaaaatgaagcaggcattatttatgcagctacacgaaaggct
gtagacgcaatctatgagcttttaagtcgctcgggcgaagctgtggcaaaataccatgcg
ggcctaccagaggacaagcgtatgtctgagcaggagcgctttttaaaagacgaggcacgc
attatggtagcgaccaatgcatttggaatgggtattgataagagtaatgtacgctttgtt
attcattatcaaatgccacgcaatatggagagctattatcaggaagcgggacgtgcagga
cgtgatggcttgccaagtgcttgtattttgctttatgcatcaggtgatgttcaaacacag
cgctttttaattgaacagacgcaggatgaaacacgcattgcacaggaattagcgaagcta
caaacgatggttgattattgtcatacggaaggctgcttacaaaatgccatcttaacgtat
tttgccgagaaagcaggggcaccttgtagtcgttgtagtaattgtaatgatgggcgagaa
gtcaaagatgtgacggtagatgcacaaaaggtattagcatgtgttgtaaggatggggcaa
aaatttggtaagacgatggtagcccaagtgttaattggctccaaaaatcaaaaggtctcg
gaatttggctttgcaaggttgtctacctatggcattttaaaaggacaatattcctcaaag
gatgtctcaacctttattgagtttttaattgctgagggtgtacttgccgttaaacatggc
acttttccaactatttatgtatcagaggaaggcaaagaagttctactcgggaatcgacag
gttatgcgaaaagaagctgttactgttcgtaagcttgttgacaatgatccgttatttgaa
catttacgattattacgtaaagagattgcggatgaagaacaagtcccaccatttgttgtg
ttctctgataaaacattgcgtgatttatgcgacaaaaaaccgacggaactagaagattta
cgacatgttagcgggattggtgaagtaaaattcgaaaaatacgggaagcgtttcttcgat
gctcttcactcttttttgaaaacaacatga
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