Lysinibacillus sp. Ag94: MY533_15290
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Entry
MY533_15290 CDS
T10411
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
lyq Lysinibacillus sp. Ag94
Pathway
lyq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lyq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MY533_15290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lyq03400
]
MY533_15290
Enzymes [BR:
lyq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
MY533_15290
DNA repair and recombination proteins [BR:
lyq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MY533_15290
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
AAA_11
Viral_helicase1
AAA_22
AAA_16
DEAD
UvrD-helicase
AAA_12
AAA
nSTAND3
TsaE
NTPase_1
AAA_28
SLFN-g3_helicase
NPHP3_N
AAA_25
AAA_17
AAA_5
Motif
Other DBs
NCBI-ProteinID:
UPW82104
LinkDB
All DBs
Position
complement(3297326..3299755)
Genome browser
AA seq
809 aa
AA seq
DB search
MAENLDLFELNKFFILGRPIVSIFHNAQNMYSIVRVKIQETNLQYEDKEIIVVGYFPPLQ
MDEQYRFTGLLKQHPKYGVQFQIETFTKEVPATEQGIIHYLSSDLFVGIGKKTAETIVEK
LGANALRLILEDPNALDAVPRLSAEKKEVIHRTIEQNLGLERVMIQLNEWGFGPQLGMKI
YQTYRTEAVELLTENPYRLIEDVEGVGFFRADELGAKLGITGNHPDRIKAAILHTLNTAA
LSDGHVYLDAENVLPLVKDMLEQSQREEIPFEIISKACIELREESKICGEETRLYLPSLY
FSEVGIASKILALIERNNKAEHFSKDEIRKAIGETEEFLNVTYAETQANAIEQALNSAVM
ILTGGPGTGKTTVVRGVVEVYAKLHGLSLNPKEYAQKEEPFPIILCAPTGRAAKRLSEST
ELPAMTIHRLLGFTGQEKEEETEREVTGKLIIVDEMSMVDTWLAHQLLKSLHEDVQVVFV
GDQDQLPPVGPGQVLKDLLASGQIPTVELTDVYRQAEGSTIIELAHQIKRGNITNDLTLK
TSDRSFIKASSDQVASVVTQVVKSAVAKGQEIRNIQVLAPMYKGPAGIDNLNKMIQELIN
PNDTGTRKELVFGDVTYRIKDKVLQLVNQPESNVFNGDMGEVISIIKAKETIEKQDLLVV
SFDGIEVTYQRSDLNQLTLAYCCSIHKSQGSEFQTVIMPVVRGYSKMLRRNLLYTGITRA
KNFLILCGEPDVLADGLQRTDDLQRFTSLRARLNPMEITEEIVEVETIPLNENLQHEKSI
DFKLTVETEPYIHPLIGMEGVSPYDYLDK
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atggcagagaatctggatttatttgaattaaataaattttttatactcggacgcccaatt
gtctctatctttcataatgcacaaaatatgtattcgatagttcgtgtgaaaattcaggag
accaacttacagtatgaagataaggaaataatagttgttggatattttccgccgttacag
atggatgaacaatatcgttttactggtttattgaaacaacatccaaaatatggtgtgcaa
tttcaaattgagacatttacaaaggaagtaccagcaacagagcagggcattattcattac
ttatcgagtgatttgtttgttggaatcggaaaaaaaactgctgaaacaatcgtagaaaaa
ttaggagcaaatgcgttacgtcttattttagaggacccaaatgctcttgatgctgtgcct
cgtttatctgctgaaaaaaaagaggttatccatcgtaccattgaacaaaatttaggctta
gaacgagtgatgatccaacttaatgaatggggtttcggaccacagcttggcatgaaaatt
taccaaacatatcgaacagaggccgttgaattattaactgaaaatccatatcgcctgatt
gaagatgtagagggtgttggtttctttcgtgccgacgagctaggtgcaaaattagggatt
actggcaatcatccagaccgtattaaggcggcgattttacatactctaaatacagcagct
ttatcagatgggcatgtgtatttagatgcagaaaatgttttaccattagtaaaagatatg
cttgagcaaagccaacgagaggaaattccctttgaaatcatttctaaagcttgtatcgaa
ttacgtgaggaaagtaaaatttgtggagaagaaacaagactatatttaccatccctatat
ttttcagaagtaggaattgcatcgaaaatattagctttaatcgaacgtaacaataaagct
gaacattttagtaaggacgaaatacgtaaagcaattggtgaaacagaagaatttcttaat
gtcacatatgctgaaacgcaagcgaatgcgattgaacaagcattaaattcggccgttatg
attttaactggtggacctgggacaggtaaaacaactgttgttcggggtgtggtagaagtg
tatgcaaagctacacggattatcattgaacccgaaggaatatgcacaaaaagaagaacct
tttccgattattttatgtgctccaacaggacgtgcggccaagcgtctatcggagtcgaca
gaacttccagcaatgacaattcatcgattattaggttttacaggtcaggaaaaagaggaa
gaaactgagcgtgaggtaacaggaaaactcattattgtagacgaaatgtcgatggtcgat
acttggctcgcgcatcaactattaaaatccttgcatgaggatgtacaagtcgtttttgta
ggagatcaagatcagcttccaccagtaggaccaggacaggtgttaaaggatttgttggca
tccgggcaaatacctactgtggaattgacagatgtttatcgacaagcagagggctcaacg
attattgaacttgctcatcaaattaaacgtggtaatatcacaaatgatcttacattaaaa
acgtctgaccgttcatttattaaagcctcctcagatcaggtagcaagcgttgtcacgcag
gttgtgaaaagtgcggttgcgaaaggtcaagaaattcgtaatatccaagtgttagcacct
atgtacaaaggtccagcaggaatagacaatttaaataaaatgattcaagaacttattaat
ccaaacgatactggtactagaaaagagctcgtttttggtgatgtcacatatcgcataaag
gacaaagtattacagcttgtcaatcaaccagaaagcaatgtttttaatggtgatatgggt
gaggtaattagtattattaaggcaaaggaaacgattgagaaacaagatttgcttgttgtg
tcattcgacggtattgaagtaacttatcaacgaagtgatctcaatcaattgacacttgcc
tactgttgttctattcataaatctcaaggctcagagttccaaaccgttattatgccggtt
gtacgtggttattctaaaatgctgcgtcgtaatttgttatatacgggtattacgcgtgct
aaaaatttcttgattttgtgtggtgagccggatgtgctagcagatggcttacagcgtacg
gatgatttacagcgctttacgtctctacgtgcaagactcaatccaatggaaattacagag
gaaattgtagaagtagaaacgattccattaaacgaaaatttacaacatgaaaaatccatt
gattttaaactaacggtagaaacagaaccatatatccatccattgattggaatggagggt
gtctctccatatgattatttagataagtga
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