KEGG   Lysinibacillus sp. Ag94: MY533_16770
Entry
MY533_16770       CDS       T10411                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
lyq  Lysinibacillus sp. Ag94
Pathway
lyq03030  DNA replication
lyq03410  Base excision repair
lyq03420  Nucleotide excision repair
lyq03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lyq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MY533_16770 (polA)
   03410 Base excision repair
    MY533_16770 (polA)
   03420 Nucleotide excision repair
    MY533_16770 (polA)
   03440 Homologous recombination
    MY533_16770 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lyq03032]
    MY533_16770 (polA)
   03400 DNA repair and recombination proteins [BR:lyq03400]
    MY533_16770 (polA)
Enzymes [BR:lyq01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     MY533_16770 (polA)
DNA replication proteins [BR:lyq03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     MY533_16770 (polA)
DNA repair and recombination proteins [BR:lyq03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     MY533_16770 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     MY533_16770 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_polI_exo1 5_3_exonuc HHH_5 HHH_2 NYN_YacP
Other DBs
NCBI-ProteinID: UPW82386
LinkDB
Position
complement(3582398..3585025)
AA seq 875 aa
MTKEKLLLLDGNSLAYRAFFALPLLTNDSGIHTNAVYGFTTMLQRILEEEQPTKILVAFD
AGKTTFRHETFTEYKGGRQKTPPELSEQFPYIRKLIDAYGIKRYELEMYEADDIIGTLAK
EASSQNMDVIVVSGDRDLTQLATEQVTVYITKKGITEIEKNTPAFIAEKYGLMPEQIIDM
KGLMGDSSDNIPGVPGVGEKTAVKLLKEHGSVESLYAAMDTVKASKMKEKLVANEEQALM
SKKLATIYTEAPIEITLADLIYNGPNEEELISVWQELGFKSLLEKSDFTVQEEEQAPFDY
EIVQEVKQEHLKDVMAVHLELENEHYHTCQQLGIALTDGAKTIYVPFDIAAKSDVLRLWL
EDATKIKYMSDSKASQAALSRAGIRLVGVEFDLLLASYINNPALSGDDVATLAKELGYRN
VQANETVYGKGAKRAIPAIDVLAEHASRKAFAVWSLQPKLEELLKENEQFELYKNLELPL
AAILGAMESEGITVNRATLEKMGQELNDKLIVIEQEIYTEAGEAFNINSPKQLGVILFDK
LSLPVIKKTKTGYSTAADVLEKLKPEHAIIEHILLYRQLGKLQSTYIEGLLKEIHEEDGK
VHTRFQQALTATGRLSSTDPNLQNIPIRLEEGRKIRQAFVPSNEDWILFSADYSQIELRV
LAHMSKDENLVDAFREGMDVHTRTAMDVFHVSEDEVDSNMRRAAKAVNFGIVYGISDYGL
SQNLDITRKEAATFIEKYFASFPGVKQYMDDIVQDAKFNGYVTTILNRRRYLPDITSSNF
NIRSFAERTAMNTPIQGSAADIIKKAMIDMDARLKKENMQAKLLLQVHDELIFEAPKEEI
ALLEKIVPEVMENAIALSVPLKVDFNYGATWYEAK
NT seq 2628 nt   +upstreamnt  +downstreamnt
atgacaaaggaaaaattgctattattggacggcaatagtttagcatatcgcgcgtttttt
gcgttgccattattgacgaatgatagtgggattcatacgaatgcagtatacggctttaca
acaatgctacaaagaatattagaggaagagcaaccaacgaaaattttggttgcctttgat
gcgggtaagacaaccttccgtcatgagacatttacggaatataaaggggggcgacaaaag
actccaccagaattatcggaacagtttccttatatacggaagcttattgatgcttatggt
attaagcgatatgagcttgaaatgtacgaagcggacgatattatagggacacttgccaaa
gaagcttcatcacaaaatatggacgtcattgtcgtatcaggagatcgtgacttaacacag
ctcgctactgagcaagtaacagtatatattactaaaaaaggcattactgaaattgaaaaa
aatacaccagcctttattgcagaaaaatacggcttaatgcccgagcaaattattgatatg
aaaggtttaatgggggattcttcagataatatccctggtgtaccaggtgtcggtgaaaaa
acagcagttaaattgctaaaagagcatggttcagtagagtcgctttatgcggcaatggat
acggtgaaggcttctaaaatgaaagaaaaattagttgccaatgaagaacaggcattaatg
agtaaaaagctcgctaccatttatactgaggcaccgattgaaataacgctcgcggatctt
atctataatggtccaaatgaagaggaattaattagcgtatggcaagagcttggctttaaa
tcattgctagagaaaagtgattttactgtccaagaagaggaacaagctccttttgactat
gaaattgtgcaagaagtaaagcaagagcatttaaaagatgtaatggcagtgcatttggag
ctagagaacgagcattatcatacatgccagcaactaggcattgcactaacagatggagcg
aaaacaatatatgtgccgtttgatattgcggctaaatcagatgtccttcgactttggtta
gaagatgctactaaaataaagtatatgtctgattcaaaagcatctcaagctgcgttaagt
cgtgcgggaattcgtttagttggtgttgaatttgacttattacttgcttcttatattaat
aatcctgcgctaagtggagatgatgtggcaacacttgcgaaagaactaggctatcgtaat
gtgcaggcaaatgagactgtttatggtaaaggggcgaaacgagctatacctgccattgat
gtacttgctgagcatgccagtcgcaaagcctttgctgtatggtctttacagcctaagctt
gaagaattgctaaaggaaaacgaacagtttgaactgtataaaaatttagagctaccgctt
gctgctattttaggggctatggaaagtgaaggaattacggtcaatcgtgccacattagag
aaaatggggcaggaactaaatgacaaactaattgtaattgaacaggagatttatacggag
gcaggagaagccttcaatattaattcaccaaagcaattaggtgtcatcctctttgataaa
cttagtcttcctgttattaaaaagacaaagacaggctattccactgcagcggatgttttg
gaaaaattaaaaccggagcatgccattattgagcatattcttttatatcgtcagcttggg
aaattacagtcaacttatatcgaaggcctgctaaaggaaatccatgaagaggatggcaag
gtgcatactcgattccaacaagcattaacagctacagggcgtttaagctcaacggatccg
aatttgcaaaacatcccgattcgtttagaagaagggcgaaaaattcgtcaagcatttgtg
ccatcgaacgaagattggatattattttctgccgattattcgcaaatcgaattgcgtgta
ttggcccatatgtcaaaggatgaaaacttagttgacgctttccgtgaaggtatggatgtt
catacacgtactgctatggatgtcttccatgtttcagaagatgaggtcgacagtaatatg
cgccgtgctgcaaaagcagtaaactttggtattgtttatggtattagtgattacggctta
tcgcaaaacttagatattacccgtaaggaagctgctacatttatcgagaaatattttgcg
agtttcccgggtgtaaaacaatatatggatgatatcgtccaagatgcgaagtttaatggt
tatgtgacaaccattttaaatagacgtcgatatttaccggatattacgagctcaaatttc
aatatacgaagctttgcagagcgtactgcgatgaatacaccaattcagggaagtgcagct
gatattattaaaaaagcaatgattgatatggatgctcgcttgaaaaaagaaaatatgcag
gccaaacttttattacaagtgcatgatgaattgatttttgaagcacctaaagaggagatt
gcattacttgaaaaaatagtaccagaggttatggagaacgcaatcgcactttcagtacca
ttaaaagtagattttaattacggtgcgacttggtacgaagcaaaataa

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