Lysinibacillus sp. Ag94: MY533_16770
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Entry
MY533_16770 CDS
T10411
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
lyq Lysinibacillus sp. Ag94
Pathway
lyq03030
DNA replication
lyq03410
Base excision repair
lyq03420
Nucleotide excision repair
lyq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lyq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MY533_16770 (polA)
03410 Base excision repair
MY533_16770 (polA)
03420 Nucleotide excision repair
MY533_16770 (polA)
03440 Homologous recombination
MY533_16770 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lyq03032
]
MY533_16770 (polA)
03400 DNA repair and recombination proteins [BR:
lyq03400
]
MY533_16770 (polA)
Enzymes [BR:
lyq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MY533_16770 (polA)
DNA replication proteins [BR:
lyq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MY533_16770 (polA)
DNA repair and recombination proteins [BR:
lyq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
MY533_16770 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MY533_16770 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
HHH_2
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
UPW82386
LinkDB
All DBs
Position
complement(3582398..3585025)
Genome browser
AA seq
875 aa
AA seq
DB search
MTKEKLLLLDGNSLAYRAFFALPLLTNDSGIHTNAVYGFTTMLQRILEEEQPTKILVAFD
AGKTTFRHETFTEYKGGRQKTPPELSEQFPYIRKLIDAYGIKRYELEMYEADDIIGTLAK
EASSQNMDVIVVSGDRDLTQLATEQVTVYITKKGITEIEKNTPAFIAEKYGLMPEQIIDM
KGLMGDSSDNIPGVPGVGEKTAVKLLKEHGSVESLYAAMDTVKASKMKEKLVANEEQALM
SKKLATIYTEAPIEITLADLIYNGPNEEELISVWQELGFKSLLEKSDFTVQEEEQAPFDY
EIVQEVKQEHLKDVMAVHLELENEHYHTCQQLGIALTDGAKTIYVPFDIAAKSDVLRLWL
EDATKIKYMSDSKASQAALSRAGIRLVGVEFDLLLASYINNPALSGDDVATLAKELGYRN
VQANETVYGKGAKRAIPAIDVLAEHASRKAFAVWSLQPKLEELLKENEQFELYKNLELPL
AAILGAMESEGITVNRATLEKMGQELNDKLIVIEQEIYTEAGEAFNINSPKQLGVILFDK
LSLPVIKKTKTGYSTAADVLEKLKPEHAIIEHILLYRQLGKLQSTYIEGLLKEIHEEDGK
VHTRFQQALTATGRLSSTDPNLQNIPIRLEEGRKIRQAFVPSNEDWILFSADYSQIELRV
LAHMSKDENLVDAFREGMDVHTRTAMDVFHVSEDEVDSNMRRAAKAVNFGIVYGISDYGL
SQNLDITRKEAATFIEKYFASFPGVKQYMDDIVQDAKFNGYVTTILNRRRYLPDITSSNF
NIRSFAERTAMNTPIQGSAADIIKKAMIDMDARLKKENMQAKLLLQVHDELIFEAPKEEI
ALLEKIVPEVMENAIALSVPLKVDFNYGATWYEAK
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaggaaaaattgctattattggacggcaatagtttagcatatcgcgcgtttttt
gcgttgccattattgacgaatgatagtgggattcatacgaatgcagtatacggctttaca
acaatgctacaaagaatattagaggaagagcaaccaacgaaaattttggttgcctttgat
gcgggtaagacaaccttccgtcatgagacatttacggaatataaaggggggcgacaaaag
actccaccagaattatcggaacagtttccttatatacggaagcttattgatgcttatggt
attaagcgatatgagcttgaaatgtacgaagcggacgatattatagggacacttgccaaa
gaagcttcatcacaaaatatggacgtcattgtcgtatcaggagatcgtgacttaacacag
ctcgctactgagcaagtaacagtatatattactaaaaaaggcattactgaaattgaaaaa
aatacaccagcctttattgcagaaaaatacggcttaatgcccgagcaaattattgatatg
aaaggtttaatgggggattcttcagataatatccctggtgtaccaggtgtcggtgaaaaa
acagcagttaaattgctaaaagagcatggttcagtagagtcgctttatgcggcaatggat
acggtgaaggcttctaaaatgaaagaaaaattagttgccaatgaagaacaggcattaatg
agtaaaaagctcgctaccatttatactgaggcaccgattgaaataacgctcgcggatctt
atctataatggtccaaatgaagaggaattaattagcgtatggcaagagcttggctttaaa
tcattgctagagaaaagtgattttactgtccaagaagaggaacaagctccttttgactat
gaaattgtgcaagaagtaaagcaagagcatttaaaagatgtaatggcagtgcatttggag
ctagagaacgagcattatcatacatgccagcaactaggcattgcactaacagatggagcg
aaaacaatatatgtgccgtttgatattgcggctaaatcagatgtccttcgactttggtta
gaagatgctactaaaataaagtatatgtctgattcaaaagcatctcaagctgcgttaagt
cgtgcgggaattcgtttagttggtgttgaatttgacttattacttgcttcttatattaat
aatcctgcgctaagtggagatgatgtggcaacacttgcgaaagaactaggctatcgtaat
gtgcaggcaaatgagactgtttatggtaaaggggcgaaacgagctatacctgccattgat
gtacttgctgagcatgccagtcgcaaagcctttgctgtatggtctttacagcctaagctt
gaagaattgctaaaggaaaacgaacagtttgaactgtataaaaatttagagctaccgctt
gctgctattttaggggctatggaaagtgaaggaattacggtcaatcgtgccacattagag
aaaatggggcaggaactaaatgacaaactaattgtaattgaacaggagatttatacggag
gcaggagaagccttcaatattaattcaccaaagcaattaggtgtcatcctctttgataaa
cttagtcttcctgttattaaaaagacaaagacaggctattccactgcagcggatgttttg
gaaaaattaaaaccggagcatgccattattgagcatattcttttatatcgtcagcttggg
aaattacagtcaacttatatcgaaggcctgctaaaggaaatccatgaagaggatggcaag
gtgcatactcgattccaacaagcattaacagctacagggcgtttaagctcaacggatccg
aatttgcaaaacatcccgattcgtttagaagaagggcgaaaaattcgtcaagcatttgtg
ccatcgaacgaagattggatattattttctgccgattattcgcaaatcgaattgcgtgta
ttggcccatatgtcaaaggatgaaaacttagttgacgctttccgtgaaggtatggatgtt
catacacgtactgctatggatgtcttccatgtttcagaagatgaggtcgacagtaatatg
cgccgtgctgcaaaagcagtaaactttggtattgtttatggtattagtgattacggctta
tcgcaaaacttagatattacccgtaaggaagctgctacatttatcgagaaatattttgcg
agtttcccgggtgtaaaacaatatatggatgatatcgtccaagatgcgaagtttaatggt
tatgtgacaaccattttaaatagacgtcgatatttaccggatattacgagctcaaatttc
aatatacgaagctttgcagagcgtactgcgatgaatacaccaattcagggaagtgcagct
gatattattaaaaaagcaatgattgatatggatgctcgcttgaaaaaagaaaatatgcag
gccaaacttttattacaagtgcatgatgaattgatttttgaagcacctaaagaggagatt
gcattacttgaaaaaatagtaccagaggttatggagaacgcaatcgcactttcagtacca
ttaaaagtagattttaattacggtgcgacttggtacgaagcaaaataa
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