Lysinibacillus sp. Ag94: MY533_19230
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Entry
MY533_19230 CDS
T10411
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lyq Lysinibacillus sp. Ag94
Pathway
lyq03420
Nucleotide excision repair
lyq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lyq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MY533_19230 (pcrA)
03430 Mismatch repair
MY533_19230 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lyq03400
]
MY533_19230 (pcrA)
Enzymes [BR:
lyq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MY533_19230 (pcrA)
DNA repair and recombination proteins [BR:
lyq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MY533_19230 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
MY533_19230 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
AAA_12
ResIII
AAA_22
Motif
Other DBs
NCBI-ProteinID:
UPW82819
LinkDB
All DBs
Position
complement(4075621..4077873)
Genome browser
AA seq
750 aa
AA seq
DB search
MEQLTKNLLAGMNPEQENAVKTTEGPLLIMAGAGSGKTRVLTHRIAYLVIEKEVYPSKIL
AITFTNKAAREMRERIDGILGNGAGDSMWVSTFHSMCVRILRRNIDQLGISRNFSILDST
DQLSVIKNVMKDENIDTKRFEPRAILNAISSAKNECKTADDYAGQINENNPYEKTIARVY
KGYEKRLRRNQSLDFDDLIMTTITLFNRVPEVLEYYQNKFQYIHVDEYQDTNKSQYLLVQ
LLAKKFKNICVVGDSDQSIYRWRGADIGNILSFEKDYPNAKAIMLEQNYRSTKRILQAAN
DVIQNNTTRYPKELRTENAEGEKIVLYKAYNEQEEAQFVVQTIQQLIEKDNRSFDDFAIL
YRTNAQSRVMEEVLVKSNMAYQIVGGTKFYDRKEIKDLLAYLRLIANNDDDLSLARIINE
PKRSIGATSFEKMARYAIEQERSIFDAMNDLIFMGLSGKAANSAEQFYAMIKGFTEMQEY
LSVTEIVEQVIDKSGYRAMLQNEKTIEAESRLENIEEFLSVTKAFEERSEDKSLIAFLTD
LALIADIDALDKDDTSKGNIILMTMHAAKGLEFPIVFIIGMEENIFPHSRSLDDMDEMEE
ERRLMYVGVTRAEERLYLTSAQSRTIFGRSSFNNVSRFLGEISEDITESISKGGSKPEVP
FASSNRSTGGYQKRTLGAVQKTQPATARLQTTGGDQFGWKAGDKAIHKKWGTGMVVSVKG
EGDSTELDIAFPQPIGIKRLLAQFAPIEKG
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atggagcaattaacgaaaaacttattagcaggtatgaatcctgagcaggaaaatgcggtt
aaaacaactgagggaccgcttctaattatggcgggtgctggatcaggaaagacacgtgta
ttgacacatcgtatagcatatttagtaatcgaaaaagaagtatacccatcaaagatttta
gctatcacatttacaaataaagctgcacgtgaaatgcgtgagcgtatagatggcatacta
ggtaacggagctggcgatagtatgtgggtatctacattccactcaatgtgtgtgcgtatt
ttgcgacgcaatattgatcagcttgggatatcacgtaacttttcaattttagattctact
gatcagctatcagttattaaaaatgttatgaaggatgaaaatattgatacgaagcgtttt
gaacctcgtgcgattttaaatgcgattagttcagcaaaaaacgaatgtaaaactgcggac
gattatgcaggtcaaatcaatgaaaataatccttacgaaaaaacgattgcccgtgtttat
aaaggttatgaaaaaagactacgccgcaatcagtcactcgattttgatgatttaattatg
acaactattacattattcaatcgtgtaccagaagtgcttgaatactaccaaaataaattc
caatatattcatgtggacgaatatcaggatacgaataaatcccaatatttactcgttcag
ttgcttgccaagaaatttaaaaatatttgtgttgtaggggattcagaccaatcgatttat
cgttggcgtggagcagatattggcaatattctttcattcgaaaaggattatccaaatgct
aaggccattatgcttgagcaaaattatcgttcaacaaaacgcatcctacaagcggcaaac
gacgtcattcaaaataatacaacacgttatccgaaagaactgcggacagaaaatgcagaa
ggtgaaaaaatcgtgttgtacaaagcttataacgagcaagaggaagcgcaattcgttgta
caaacaatccaacagcttattgaaaaggataatcgttcatttgatgactttgcgatatta
tatcgtacaaatgctcagtcccgtgtgatggaggaagtgcttgttaagtccaatatggct
tatcaaatagttggtggtactaagttctatgatcgtaaagagattaaggatttacttgcc
tacttgcgtcttattgccaataatgatgatgatttatcactcgcacgtattattaatgag
ccaaagcgtagtatcggtgcaacttcctttgaaaaaatggcgcgctatgcgattgaacag
gagcgctctatttttgatgctatgaatgatcttatattcatgggtctttcagggaaggct
gctaattcagctgagcaattttatgcaatgattaaaggctttacagagatgcaagaatat
ttatcggtgacagaaattgtagagcaggtcattgacaaatctggttatcgagcaatgcta
caaaatgaaaagacgattgaagcggaaagccgcttagaaaatattgaagagtttttatca
gtaacaaaggcttttgaagagcgcagtgaagataaaagcttaattgcctttttaacagat
ttagcgctaattgcagatattgatgcacttgataaagatgacacatcaaagggcaacatt
attttgatgacgatgcatgctgcaaagggcttagaattccctatcgtctttatcattgga
atggaggaaaatattttcccacattctcgttcacttgatgatatggatgaaatggaagaa
gaaagacgattaatgtatgtcggcgtgacgcgggccgaggaacgtttatatttaacgagt
gcacaaagccgtacgatttttggtcgttctagctttaataatgtttctcgtttcctaggt
gaaatttcagaagatattacagaatcaatatccaaaggtggttcgaagcctgaggttccg
tttgcctcaagtaatcgttctacaggtggctatcaaaaacgtacacttggagcggttcag
aaaacacagcctgcaactgctcgtttacaaacaacaggtggtgaccaatttggctggaaa
gctggagacaaagcaatccataaaaaatggggaacaggtatggttgttagtgtaaaaggt
gagggtgatagtacagagctagatattgcctttccacaacctattggtattaagcgattg
ctagcacaatttgcccctattgaaaaagggtaa
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