Lysinibacillus sp. RS11: AB9L17_03140
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Entry
AB9L17_03140 CDS
T11529
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
lyr Lysinibacillus sp. RS11
Pathway
lyr00260
Glycine, serine and threonine metabolism
lyr00460
Cyanoamino acid metabolism
lyr00630
Glyoxylate and dicarboxylate metabolism
lyr00670
One carbon pool by folate
lyr00680
Methane metabolism
lyr01100
Metabolic pathways
lyr01110
Biosynthesis of secondary metabolites
lyr01120
Microbial metabolism in diverse environments
lyr01200
Carbon metabolism
lyr01230
Biosynthesis of amino acids
lyr01240
Biosynthesis of cofactors
lyr04981
Folate transport and metabolism
Module
lyr_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
lyr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
AB9L17_03140 (glyA)
09102 Energy metabolism
00680 Methane metabolism
AB9L17_03140 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
AB9L17_03140 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
AB9L17_03140 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
AB9L17_03140 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
AB9L17_03140 (glyA)
Enzymes [BR:
lyr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
AB9L17_03140 (glyA)
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
SelA
Motif
Other DBs
NCBI-ProteinID:
XGY95506
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Position
610230..611471
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AA seq
413 aa
AA seq
DB search
MAYEKLAVQDKAVLDGILAEKKRQQANIELIASENFVSEAVMEAQGSVLTNKYAEGYPGK
RYYGGCEHVDVVEDIARDRVKEIFGAEYANVQPHSGAQANMAVYHTILEPGDTVLGMNLS
HGGHLTHGSPVNFSGVLYNFVEYGVTKDTQVIDYEDVRQKALEHKPKLIVAGASAYPREI
DFAKFREIADEVGAYFMVDMAHIAGLVAAGEHQSPVPYADFVTSTTHKTLRGPRGGLILA
SKEWEQKLNKSVFPGIQGGPLMHVIAAKAVAFGETLQPEFKEYAKQIKANAKALADVLIA
EGVEIVSGGTDNHLLLLNVKSLGLTGKVAEHALDEVGITTNKNTIPYDTESPFVTSGIRI
GTPAVTSRGFKEEDMKEVGAIIATVLKNPEDEAVKAEAKARVKALTDKHPLYA
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggcatacgaaaaattagcagtacaagacaaagcagtattagatggaattcttgcggag
aaaaaacgtcaacaagcaaatatcgagttaatcgcatcagaaaactttgtatctgaagca
gtaatggaagcacaaggttctgttttgacaaataaatatgctgaaggttatccaggtaaa
cgctactatggcggttgtgaacacgtagatgttgtggaagatattgcacgtgatcgtgta
aaagaaatctttggagcggaatacgcgaacgttcaaccacactctggtgcacaagcgaac
atggctgtatatcacacaattttagaaccaggtgatacagttcttggtatgaatctttct
catggcggtcacttaacacatggatctccagtaaacttctcaggtgttctttataatttc
gttgaatatggcgtaacgaaagatacacaagtaatcgattatgaagatgtacgccaaaaa
gcattagagcataaaccaaaactaattgttgcaggtgcatctgcatacccacgtgaaatc
gattttgctaaattccgtgaaatcgctgatgaagtaggtgcatatttcatggtggatatg
gcgcacattgcaggtcttgtagctgctggagaacatcaatcaccggtgccatacgctgat
tttgtcacttctacaacacacaaaacattacgtggtccacgtggtggtttaatccttgct
tcgaaagaatgggagcaaaagcttaataaatctgtattcccaggtatccaaggtggacca
ttaatgcacgtgatcgctgccaaagctgtagcattcggtgaaacattacaaccagaattc
aaagaatatgcaaaacaaattaaagcgaatgcaaaagctttagcagacgtattaattgca
gaaggtgttgaaattgtatctggtggtacggataaccacttgttacttcttaatgtgaaa
tctcttggtttaacaggtaaagtggcagaacacgcacttgatgaagtaggtattacaaca
aataaaaatacaattccttacgatacagaatctccattcgtaacttctggtatccgcatt
ggtacaccagctgtcacatctcgtggtttcaaagaagaggacatgaaagaagttggtgca
attattgcaacagttcttaaaaatccagaagatgaagcagtcaaagctgaagcgaaagct
cgtgtcaaagcattaacggacaaacatccattatacgcataa
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