Lysinibacillus sp. RS11: AB9L17_05055
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Entry
AB9L17_05055 CDS
T11529
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
lyr Lysinibacillus sp. RS11
Pathway
lyr00470
D-Amino acid metabolism
lyr00550
Peptidoglycan biosynthesis
lyr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lyr00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AB9L17_05055 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AB9L17_05055 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
lyr01011
]
AB9L17_05055 (murD)
Enzymes [BR:
lyr01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
AB9L17_05055 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
lyr01011
]
Precursor biosynthesis
Amino acid ligase
AB9L17_05055 (murD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
2-Hacid_dh_C
AlaDh_PNT_C
Motif
Other DBs
NCBI-ProteinID:
XGY95871
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Position
1042407..1043756
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AA seq
449 aa
AA seq
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MRNYTDLQHKKVLVLGLAKSGVAAAEILHELGAFVTVNDSKPFDESPDAQGLLQKGITVI
CGRHPEDLLDEGFELVVKNPGIPYSNKIVADAISREIPVWTEIELAYLISEAPFIGITGS
NGKTTTTTLIFDMLNNGGPTPLIAGNIGTVACGVAREAQKENVIVTELSSFQLMGIETFK
PKIAILTNLYDAHLDYHGTFDNYAEAKFGVTRNQDESDYFIYNADQPIVVGYATKSNAKK
VPFSSKGRTEEGISADETTIYWQGEPYLNRANIALPGKHNLENILAAVAACILVGCDKAK
MEEVLAKFGGVRHRTQFVREWNGRKIYNDSKATNCLATKSALDAFQAPVILLAGGLDRGH
SFEELRPCMNHVKGVVAFGETGLRFVEFAKSCGVQQTVIAQNVEDAVHYAAPMSTEGDVI
LLSPACASWDQYDSFEIRGDVFIDAVMKL
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgagaaactatacagatttacaacataaaaaagtccttgttttaggtctagcaaaaagt
ggtgtggctgcagctgagattttacatgagcttggcgcctttgtgacggtcaatgattca
aaaccatttgacgaaagcccagatgcgcaaggcttattgcaaaaggggattaccgttatt
tgtgggcgtcacccggaggatttactggatgaaggctttgaattagttgtgaaaaatccg
gggattccttatagcaacaagatagtagcagatgccattagccgtgaaattcccgtatgg
acagaaattgagcttgcttatttaattagtgaagctccatttattggtattacagggtca
aatggtaaaacaacaacgacaactttaatttttgatatgctgaataatggtggtccaaca
ccgttaattgcagggaatattgggacagtagcatgtggtgttgcaagagaggctcaaaaa
gagaatgtaattgttacagagttatcttctttccaactaatgggcatagagacattcaag
ccgaaaatcgctattttaactaatctttatgatgctcatcttgattatcatgggacattt
gacaactatgcagaagcaaaatttggtgtcacacgtaatcaagatgaaagcgattatttc
atctacaatgccgatcagccaattgttgttggttatgcaacaaaatccaatgctaaaaag
gtaccatttagttctaaggggcgtacagaagagggtattagtgcagatgaaacaacaatt
tactggcaaggtgaaccatatctaaatcgagcaaatatcgctttgcctggtaagcataac
ttagaaaatattttagcagctgtagccgcttgtattttagtaggctgtgacaaagctaaa
atggaagaagttttagcaaagtttggaggagttcgtcaccgtactcagtttgtgcgcgaa
tggaacggacgaaaaatttacaatgactctaaagcgacaaactgcttagctacaaaaagt
gctttagatgctttccaagcacctgttattttacttgcaggtggcttagatcgaggacat
tcgtttgaagaattacgtccatgcatgaaccatgtaaaaggtgttgttgcctttggagaa
acaggtctacgatttgtagaatttgcaaagtcgtgtggcgtacagcaaactgtcattgcc
caaaatgttgaagatgccgtacattatgcggcaccgatgtcgacagaaggcgatgttatt
ctcttatctccggcgtgtgcaagctgggatcaatatgacagctttgaaatacgaggcgat
gtttttattgatgctgtaatgaagctgtaa
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