Lysinibacillus sp. RS11: AB9L17_17315
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Entry
AB9L17_17315 CDS
T11529
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
lyr Lysinibacillus sp. RS11
Pathway
lyr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lyr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AB9L17_17315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lyr03400
]
AB9L17_17315
Enzymes [BR:
lyr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
AB9L17_17315
DNA repair and recombination proteins [BR:
lyr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AB9L17_17315
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
AAA_11
Viral_helicase1
AAA_22
DEAD
AAA_16
UvrD-helicase
PIF1
AAA_12
AAA
nSTAND3
TsaE
SLFN-g3_helicase
AAA_28
NTPase_1
RsgA_GTPase
NPHP3_N
AAA_25
AAA_5
AAA_17
Motif
Other DBs
NCBI-ProteinID:
XGY93603
LinkDB
All DBs
Position
complement(3346247..3348679)
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AA seq
810 aa
AA seq
DB search
MAENLDLFELNKFFILGRPIVSIFHNAQNMYSIVRVKIQETNLQYEDKEIIVVGYFPPLQ
MDEQYRFTGIMKQHPKYGVQFQIETFTKEVPATEQGIIHYLSSDLFVGIGKKTAETIVEK
LGANALRLILEDPNALDAVPRLSAEKKEVIHRTIEQNLGLERVMIQLNEWGFGPQLGMKI
YQTYRTEAVELLTENPYRLIEDVEGVGFFRADELGAKLGITGNHPDRIKAAILHTLNTAA
LSDGHVYLDAEHVLPLVKDILEQSQREEIPFETISKACIELREESKICGEETRLYLPSLY
FSEVGIASKILALIERNNKAEHFSKDEIRKAIGETEEMLNVTYAETQANAIEQALNSAVM
ILTGGPGTGKTTVVRGVVEVYAKLHGLSLNPKEYAQKEEPFPIILCAPTGRAAKRLSEST
ELPAMTIHRLLGFTGQEKEEETEREVTGKLIIVDEMSMVDTWLAHQLLKSLHEDVQVVFV
GDQDQLPPVGPGQVLKDLLASKQIPTVELTEVYRQAEGSTIIELAHQIKRGQITNDLTVK
TTDRSFIKASSDQVASVVTQVVKSAVAKGQEIRNIQVLAPMYKGPAGIDNLNKMIQELIN
PNDTGTRKELVFGDVTYRIKDKVLQLVNQPESNVFNGDMGEVISIIKAKETIEKQDLLVV
SFDGIEVTYQRSDLNQLTLAYCCSIHKSQGSEFQTVIMPVVRGYSKMLRRNLLYTGITRA
KNFLILCGESDVLADGLQRTDDLQRFTSLRARLNPMNIAEEVAEDETIPLKDDLQKEKPS
IDSKLTVETEPYIHPLIGMDGISPYDYLDE
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atggcagagaatcttgatttatttgaactaaataaattttttatactcggacgtccaatc
gtctctatctttcataatgcacaaaatatgtattcgatagttcgtgtgaaaattcaagag
accaacttacagtatgaggataaggaaataattgttgttggatattttccgccgttacaa
atggatgaacaatatcgttttacaggtataatgaaacaacatccaaaatatggtgttcaa
tttcaaattgagacgtttacaaaagaagtgccggcaacagagcaagggattattcattac
ttatcgagtgatttgtttgttgggataggaaaaaaaactgctgaaacaatcgtagagaaa
ctcggggcgaatgcgttacgtcttattttagaggatccaaatgcgcttgatgctgtacct
cgactatctgctgaaaaaaaagaggttatccatcgtacaattgaacaaaatctaggctta
gaacgagtgatgattcaacttaatgaatggggtttcggaccacagctcggcatgaaaatt
taccaaacatatcgaacagaggcagttgaattattaactgaaaatccataccgccttatt
gaagatgtagagggtgtgggtttctttcgtgccgacgagctaggtgcaaaattagggatt
actggcaatcatccagaccgtattaaagcggcgattttacatactctaaatacagcagct
ttatcggacgggcatgtgtatttagatgcagaacatgttttaccgctagtaaaagatatt
cttgagcaaagccaacgagaagaaattccttttgagaccatttctaaagcttgcatcgaa
ttgcgtgaggaaagtaaaatttgtggggaagagacgagattatatttaccatctctatat
ttctcagaagtcggaattgcatcaaaaatattagctttaatcgaacgtaacaataaggct
gaacattttagcaaagacgaaatacgtaaagcgattggcgaaacagaagaaatgctcaat
gtcacatatgctgaaacacaagcgaatgctattgagcaagctttaaactcagctgttatg
attttaactggtggtcctggtactggtaaaacaactgttgttcggggtgtagtagaagtg
tatgcaaagttacatggactatcattaaacccgaaggaatacgcacaaaaagaagagcca
tttccgattattttatgtgctccaacaggacgtgctgccaagcgtttatcggaatcaaca
gaacttccagcaatgacaattcatcgactgctaggctttactggtcaggagaaagaggaa
gaaactgaacgtgaagttacagggaaactcattattgtagatgaaatgtcgatggtcgat
acttggctcgcgcatcaattattaaaatccttgcatgaggatgtgcaagttgtatttgtt
ggtgatcaggatcagctcccaccagtaggtccagggcaggtattaaaggacttgttagct
tccaagcaaatacctactgtggaattaacagaggtttatcgacaagcagagggctcaaca
attattgaacttgctcatcaaattaaacgtggtcagatcactaatgatttaactgtaaaa
accactgaccgttcatttattaaagcctcctcagatcaagtagcaagcgttgttacacag
gttgtgaaaagtgcggttgcgaaaggtcaagaaattcgtaatatccaagtgttagcacca
atgtacaaaggtccagcaggaattgacaatttaaataaaatgattcaggagctaattaat
ccaaacgatactggtactagaaaagagcttgtctttggtgatgtcacatatcgcataaag
gataaagtcttacaacttgtcaatcaacctgaaagcaatgtttttaatggtgatatgggt
gaagtcatcagtattatcaaggcgaaggaaacaattgagaaacaagatttgcttgttgtg
tcattcgatggtatagaagtaacttatcagcgtagtgatctcaatcaattgacacttgct
tattgttgctctattcataaatcgcaaggctctgagttccaaacagttattatgccagtt
gtacgaggctattctaaaatgttgcgtcgtaatttattatatacaggtattacgcgtgca
aaaaatttcttgattttatgtggtgagtcagatgtgctagcagatggcttacaacgtacg
gatgatttacagcgctttacgtccttacgtgcaagactcaatccaatgaatatagcagag
gaagttgcggaagatgaaacgattcctttgaaagacgatttacagaaagaaaaaccatcc
attgacagtaaactaacggtcgaaacggaaccatatatccatccattaattggaatggat
ggtatctcgccgtatgattatttagatgagtaa
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