Lysinibacillus sp. RS11: AB9L17_21060
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Entry
AB9L17_21060 CDS
T11529
Symbol
yhaM
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
lyr Lysinibacillus sp. RS11
Brite
KEGG Orthology (KO) [BR:
lyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lyr03019
]
AB9L17_21060 (yhaM)
Messenger RNA biogenesis [BR:
lyr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AB9L17_21060 (yhaM)
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Ortholog
Paralog
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Motif
Other DBs
NCBI-ProteinID:
XGY94268
LinkDB
All DBs
Position
complement(4068749..4069687)
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AA seq
312 aa
AA seq
DB search
MKGITTLQVGESVDQFLLIKQATKGVTTVGKPFMSLLLQDKSGDIEAKLWDTNEEHEKMY
QAEAIVRVGGEIHDYRGKSQLRIKAIRVAKPEEGIAINDLVPSSATPKEQLYEELTQFFF
DIKNPNISRITRAAIKKHQDAILVYPAATKNHHDYASGLLDHMVSMLKLGKAIADLYPTL
NRDLLYAGIILHDIGKVVELSGPVATVYTVEGNLLGHITIMVNEIAKIASELEIEGEEVM
LLQHMVLSHHGKEEWGSPKKPMIQEAEILHYIDNIDAKMNMLTRALGKTAPGEFTERLFP
LDNRSFYKPAIK
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgaagggtattacgacgctccaggttggagaatcggttgatcaatttttattaattaaa
caagcgacaaaaggggttaccacagttgggaagccatttatgtcactgttattacaagat
aaaagtggagatattgaggcgaagctatgggatacaaatgaagagcacgaaaaaatgtac
caagctgaggcaattgtacgtgtgggtggagaaattcatgactaccgtggcaaaagtcaa
ttgcgtataaaagcgatccgtgtagcaaaaccagaggagggaattgctattaatgattta
gttccttcctcagcaactccaaaagaacaattatatgaagagttgacacaatttttcttt
gatattaaaaatccgaatatatcacgaattaccagagcagctattaaaaaacatcaggat
gctattttagtttatccagctgcaacaaagaatcatcatgattatgcatcaggcttactg
gatcatatggtatcaatgttgaaactcggtaaagccattgctgatctatatcctacatta
aatcgagatttgttatatgcaggaattattttgcacgatattggcaaagttgttgagtta
tcaggaccggttgcaacagtgtacacggttgaggggaatttacttggccatatcactatt
atggttaatgaaattgccaagattgctagtgaactagagatcgagggcgaagaagtaatg
ctattgcaacatatggtgctatctcaccatggtaaagaagaatggggcagcccgaaaaaa
ccaatgattcaagaagcggaaatcttgcattacattgataatattgatgcaaagatgaat
atgctaacacgagcacttggtaaaactgcgccaggtgaatttactgagagacttttcccg
ctagataatcgatcattttacaagccggctattaagtaa
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