Lysinibacillus sp. YS11: LBYS11_00030
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Entry
LBYS11_00030 CDS
T05299
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
lys
Lysinibacillus sp. YS11
Brite
KEGG Orthology (KO) [BR:
lys00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lys03032
]
LBYS11_00030
03400 DNA repair and recombination proteins [BR:
lys03400
]
LBYS11_00030
Enzymes [BR:
lys01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
LBYS11_00030
DNA replication proteins [BR:
lys03032
]
Prokaryotic type
DNA Topoisomerases
LBYS11_00030
DNA repair and recombination proteins [BR:
lys03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LBYS11_00030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
WDR55
Motif
Other DBs
NCBI-ProteinID:
AUS84853
LinkDB
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Position
6166..8631
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AA seq
821 aa
AA seq
DB search
MSEQERSGVKGVNITEEIETSFLDYAMSVIVSRALPDVRDGLKPVHRRILYGMQELGNTA
DKAYKKSARIVGDVMGKYHPHGDSSIYDAMVRMAQDFSYRYMLVDGHGNFGSVDGDGAAA
MRYTESRMSKIAMEMLRDINKDTIDYTDNYDGSEKEPIVLPSRYPNLLVNGAAGIAVGMA
TNIPPHQLGETIDAVIALSENPAITTEELMEIIPGPDFPTGGLILGRSGIRRAYETGRGS
IIIRAKVEIEQKANGKETILIHELPYQVNKAKLIEKIAELVRDKKIDGITNLRDESDRRG
MRVVIEVRKDANANVVLNNLYKQTAMQSSFGINMLSLVNGQPKVLGLKEMLYHYLEHQKV
IIRRRTEFDLRKAEDRAHILEGLRIALDHIDEIIAIIRGSRSGEEAKPQLMERFSLSERQ
AQAILDMRLVRLSGLEREKIEAEYQELQVLIAELKAILADEEKIVDIIRTEILELKERFN
DTRRTEITSGGIEMIEDEDLIPVENSVVTLTHNGYIKRLAANTYRSQKRGGRGVQGMGTN
EDDFVEHLMNTSTHDTILFFTSKGKVFRAKGYEIPEFGRTAKGLPIVNLLNIEKGEKVTA
MIRVASFDEDAYFIFTTKTGITKRTPVSQFANIRTNGLIAISLREDDDLISVRLTDGEKQ
VIIGTRDGMLVRFQEDDIRSMGRTAGGVRGIKLRDGDEVVGMEIVEPGQEILVVTEKGYG
KRTSEEDYRLQSRGGVGLKTIQITDKNGPMVAVKTVDGSEDLMLITINGMLIRMDVNDIS
LIGRSTQGVRLIRLGDDELVATVAKVEKAEESFEDEEEVEE
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
ttgtcagaacaagaacgctccggtgttaaaggagttaatataacagaagaaattgaaaca
tcctttcttgattatgcaatgagtgtaattgtatcacgtgcattacctgatgtacgtgat
ggattaaaaccagttcatcgtcgtattttatatgggatgcaggaattaggtaatacagca
gataaagcctacaaaaagtcagcacgtatcgttggggatgtaatgggtaagtaccatcca
catggtgactcttccatctatgatgcaatggtacgtatggcacaggattttagctatcgc
tacatgcttgttgatggtcacggaaacttcggttctgttgatggtgatggcgcagcagcc
atgcgttatacagaatcacgtatgtctaaaatagcaatggaaatgctccgtgatattaat
aaagatacaattgactatacagataactatgatggatcagaaaaagaaccaatagtttta
ccaagtcgctatccaaatcttttagtcaacggtgcagcagggattgctgtaggtatggca
acaaatattccaccacatcaattgggcgaaacaattgatgctgttatagcactttctgaa
aatccagccattacgactgaagagctaatggaaatcattcctggccctgattttcctact
ggtggattaattttaggacgtagtggtattcgtagagcctatgaaactggtcgaggttcc
attatcatccgtgcgaaagtggaaattgagcaaaaggcaaatggtaaggaaactattctt
attcatgaattgccttaccaagtgaataaggctaagcttattgaaaaaattgcagagctt
gtacgtgataaaaaaatagatggaatcacaaatttacgtgatgaatcagaccgtcgtggt
atgcgtgtagtgattgaagttcgtaaagatgcaaatgctaatgttgtactaaataattta
tataaacaaacagctatgcaatctagcttcggtatcaatatgctatctttagtaaacggt
cagcctaaagtattaggcttaaaagaaatgctataccattatttagaacaccaaaaagta
attattcgtcgtcgtacagagtttgatcttcgaaaagctgaagaccgcgctcacatttta
gagggcttacgaatcgcactcgatcatattgatgaaataatcgctattatacgtggttca
cgtagtggtgaagaagcaaaacctcaattaatggaacgctttagcttatcggagcgtcag
gctcaagctattttagatatgcgcctcgttcgattaagtggcttagaacgtgaaaaaatt
gaagcagaatatcaagagcttcaagttcttatagctgaattaaaggcaatattagcagat
gaagagaaaattgtagatattattcgtactgaaatcttagagttgaaagaacgttttaat
gatacgcgccgtactgagattacatcaggtggaattgaaatgattgaggatgaggattta
attcctgttgaaaactcagttgttactttaacacataatggctatatcaagcgtttagct
gcgaatacatatcgtagtcaaaagcgtggtggtcgtggtgtacaaggaatgggtacaaat
gaagacgactttgtagagcatctaatgaatacttctacccacgatacaattttattcttc
acgtctaaaggtaaagtatttagagcaaaaggatatgaaattcctgagttcggtcgtact
gctaaagggttaccaatcgtaaacttgcttaatatagaaaaaggcgaaaaagtaacagct
atgattcgtgttgcgtcgtttgatgaagatgcttactttatctttaccacaaaaacaggt
attacaaaacgtacccctgtatcacaatttgctaacatccgaacaaatggtttaatcgca
atcagcttgagagaagacgacgatcttatttcggtacgtcttacagatggagagaaacaa
gtgattattggtactcgcgatggtatgctcgttcgtttccaagaagacgacattcgatct
atgggccgtacagctggtggtgttcgaggcattaagctacgtgatggtgatgaagtagtt
ggcatggagattgttgaaccagggcaagaaatattagtagtaactgaaaaaggttacggt
aaacgtacttctgaagaggactatcgtttacaaagtcgtggtggagtaggactgaaaact
attcagattacagataagaatggtccaatggtggctgtaaaaaccgtcgatggttctgag
gatttaatgcttataactattaatggtatgcttatccgtatggatgtaaatgatatttca
ttaattgggcgcagtacgcaaggtgtacgtttaattcgactaggagatgacgaattggtt
gcaactgtcgctaaagtggaaaaagcagaagagtcttttgaagacgaagaggaagtcgaa
gaataa
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