KEGG   Lysinibacillus sp. YS11: LBYS11_03710
Entry
LBYS11_03710      CDS       T05299                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
lys  Lysinibacillus sp. YS11
Pathway
lys00010  Glycolysis / Gluconeogenesis
lys00020  Citrate cycle (TCA cycle)
lys00260  Glycine, serine and threonine metabolism
lys00280  Valine, leucine and isoleucine degradation
lys00310  Lysine degradation
lys00380  Tryptophan metabolism
lys00620  Pyruvate metabolism
lys00630  Glyoxylate and dicarboxylate metabolism
lys00640  Propanoate metabolism
lys00670  One carbon pool by folate
lys00785  Lipoic acid metabolism
lys01100  Metabolic pathways
lys01110  Biosynthesis of secondary metabolites
lys01120  Microbial metabolism in diverse environments
lys01200  Carbon metabolism
lys01210  2-Oxocarboxylic acid metabolism
lys01240  Biosynthesis of cofactors
Module
lys_M00009  Citrate cycle (TCA cycle, Krebs cycle)
lys_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
lys_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
lys_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:lys00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    LBYS11_03710 (lpdA)
   00020 Citrate cycle (TCA cycle)
    LBYS11_03710 (lpdA)
   00620 Pyruvate metabolism
    LBYS11_03710 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    LBYS11_03710 (lpdA)
   00640 Propanoate metabolism
    LBYS11_03710 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    LBYS11_03710 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    LBYS11_03710 (lpdA)
   00310 Lysine degradation
    LBYS11_03710 (lpdA)
   00380 Tryptophan metabolism
    LBYS11_03710 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    LBYS11_03710 (lpdA)
   00670 One carbon pool by folate
    LBYS11_03710 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lys04147]
    LBYS11_03710 (lpdA)
Enzymes [BR:lys01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     LBYS11_03710 (lpdA)
Exosome [BR:lys04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   LBYS11_03710 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox_3 Pyr_redox GIDA FAD_oxidored NAD_binding_8 HI0933_like DAO FAD_binding_2 Thi4 AlaDh_PNT_C 3HCDH_N FAD_binding_3 Lys_Orn_oxgnase Lycopene_cycl NAD_binding_9 NAD_binding_7 HamA Trp_halogenase Alpha_E3_glycop
Other DBs
NCBI-ProteinID: AUS85490
LinkDB
Position
806718..808055
AA seq 445 aa
MENFDIAIIGAGPGGYVAAIHAAKNGKKVALIERDKLGGACYNVGCIPSKILLEHSKLVQ
EIKRGNSWGIEVPKVEINFPRLMQRKDTIIHELLTNIEQYIIDNHITLYRGEASIVKDLT
ITIGNETIMASDIILATGSKPFVPRFEGLETSTYYTTDTFFEIDKLPAQLTIIGGGVIAI
EMAFSLAPLGTKVTVLNHSEDILQTEEAEARPLIREKMKKFGIELVTDFHFEKFEGNIIH
TSKGSYTYENLLFATGRRPNIEIAEQLGLAFDGRLIAVNEHFETSLPNIYAIGDLVGGYQ
LAHSASAEGIYVVDYIVGNQPIPIDQTSIPRCVYTNPEIATFGLLEEQVKAPYIVTKMPL
QTNPKALMEGNTEGFVKLISSKDNGQILGACVVADGATEILNALLATKNAGGTARTLAHM
IFPHPTVSEHIGDVAKAVFGKAIHQ
NT seq 1338 nt   +upstreamnt  +downstreamnt
atggaaaattttgatattgctattattggggcgggaccaggtggctatgtggctgccata
catgcagccaagaatggcaaaaaagtagcactcatcgaacgagataaattgggaggagcc
tgctataatgttggctgcattccatcaaagattttattggagcatagtaaacttgtgcag
gaaataaaaagagggaatagctggggaatagaagtgcctaaagtggaaattaattttcct
cgactaatgcaacggaaagatacaattattcatgaactactaacaaacattgagcaatat
attatcgataatcatataactttatatcgtggtgaagcttcaatcgtaaaggacttaacg
ataactatcgggaatgagacgataatggcatcagatataattttagcgacaggtagtaaa
ccctttgttccacgattcgaagggttagagacatccacctactatacgacggacacattt
tttgagatagacaagcttccagcccagctaacaatcattggcgggggcgtaattgccatt
gaaatggcgtttagtttagcaccacttggtacaaaggtaacagtgcttaatcatagcgag
gatattttacaaacggaagaggcggaagcaagaccgctgattcgagaaaagatgaagaaa
tttggtattgaacttgtgacagattttcattttgaaaaatttgaaggtaatatcattcat
acatctaaaggatcttatacatatgaaaaccttttatttgctactggacgtcgtcccaat
atagaaattgctgagcaactaggattagcttttgatggtcgattaatcgctgttaatgag
cattttgaaacaagcctgccgaatatttatgcgataggtgacttagtgggtggttatcaa
cttgcacattctgccagtgctgaaggaatttacgttgtcgattatattgtaggaaatcaa
ccaataccaattgatcaaacaagcattccacgttgtgtttatacaaaccctgaaattgct
acatttggtttactagaagagcaagtcaaggcaccgtacattgtaacgaaaatgccacta
caaacaaacccaaaggcattaatggaggggaatactgaaggctttgtcaagctaatttca
tctaaggataatgggcaaattttaggggcttgtgtagtagctgatggtgcaacagaaata
cttaatgcactattagcaacaaaaaatgctggtggtacagctcgaacacttgcacatatg
atttttccacatcctactgtatcggagcatattggagatgtggctaaagctgtgtttggg
aaagcaatacaccaataa

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