Lysinibacillus sp. YS11: LBYS11_04840
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Entry
LBYS11_04840 CDS
T05299
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
lys
Lysinibacillus sp. YS11
Brite
KEGG Orthology (KO) [BR:
lys00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lys03019
]
LBYS11_04840
03009 Ribosome biogenesis [BR:
lys03009
]
LBYS11_04840
03036 Chromosome and associated proteins [BR:
lys03036
]
LBYS11_04840
Enzymes [BR:
lys01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
LBYS11_04840
Messenger RNA biogenesis [BR:
lys03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LBYS11_04840
Ribosome biogenesis [BR:
lys03009
]
Eukaryotic type
90S particles
RNase
LBYS11_04840
Prokaryotic type
rRNA processing factors
LBYS11_04840
Chromosome and associated proteins [BR:
lys03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
LBYS11_04840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
NTP_transf_4
Motif
Other DBs
NCBI-ProteinID:
AUS85703
LinkDB
All DBs
Position
1048895..1049659
Genome browser
AA seq
254 aa
AA seq
DB search
MAMKRKGTMQKSGVLPEKVRNQFELLQHELNITFINKNLLYQAFTHSSYVNEHRRKLFTD
NERLEFLGDAVLELSVSKYLFEKYPNMSEGELTKLRASIVCEPSLVIFANELGFGRFVLL
GKGEELTGGRERPALLADVFESFVGALYLDQDLQTVVSFLERIVFPKVEVGAFSHVMDFK
SQLQEMVQQTNNGLLHYEIIDEKGPAHNRTFVSSVLLNGQELGIGRGKSKKEAEQQAAQC
AMRMMREEAAKEEA
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atggctatgaaaagaaaaggaactatgcagaaatctggcgtacttcctgaaaaagtacgc
aaccaatttgagctgttacagcatgaattaaatatcacatttattaataaaaatttattg
tatcaagcattcacgcattcatcttatgtgaatgagcatcgccgtaaattatttacggat
aatgagcgtcttgaatttttaggagacgcagtacttgaactgtctgtttctaaatatctt
tttgagaaatacccaaatatgagcgagggtgagttaacaaagctaagagcttccattgta
tgtgagccatcactagtgatttttgctaacgagctaggctttggacgctttgtattactt
ggaaaaggtgaggaattaacaggtggtcgggaacgtccagcgctgcttgcagatgtcttt
gaatcatttgtaggtgcactctatttagatcaagatttacaaacggtcgtgtcattttta
gaacgaatcgtgttcccaaaagtagaagtcggtgctttttcgcatgtgatggattttaaa
agtcaattgcaagaaatggtacagcaaacgaataatggacttcttcattatgagattatc
gatgaaaaaggcccagcacataatcgtacctttgtatcaagcgtattattaaatggacaa
gagcttggtattggtcgtggaaagtcaaaaaaagaagccgagcagcaagctgcacaatgt
gcaatgcggatgatgcgtgaagaagctgcaaaagaggaggcttaa
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