Lysinibacillus sp. YS11: LBYS11_08350
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Entry
LBYS11_08350 CDS
T05299
Name
(GenBank) UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
KO
K01929
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:
6.3.2.10
]
Organism
lys
Lysinibacillus sp. YS11
Pathway
lys00300
Lysine biosynthesis
lys00550
Peptidoglycan biosynthesis
lys01100
Metabolic pathways
lys01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
lys00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LBYS11_08350
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LBYS11_08350
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
LBYS11_08350
Enzymes [BR:
lys01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
LBYS11_08350
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPgrasp_YheCD
Mur_ligase_M
Mur_ligase_C
ATPgrasp_ST
GSH-S_ATP
ATP-grasp_3
Birna_VP1_thumb
Motif
Other DBs
NCBI-ProteinID:
AUS86346
LinkDB
All DBs
Position
1754922..1757114
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AA seq
730 aa
AA seq
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MKGSLAMTIIGMLHHRLDPTTVLKSYAFAAVAKAEGATFFYFTPKSVDFAKRSIRAKVYE
NGQWQEKTMPFPDVIYNAGSPEKLSVSKEIIDRLKEEIPFTTHSIGNKWNVMKRLKEAKE
FEQYLIPSEIVKDADLFHKFVNYYKRVVFKPIDGRKGKGIYFITKAGAKYFEVRKDSTTT
TYTKPQLDALIKEQLASGTFIMQPYIQSVTKSGQVYDFRLHVQKNGEGKWVVTTVYPRIA
PNGSIIPNINNGGYTNYLDPFLEQEFKDEAYNIRRMLEHFSLALAHHLDEIQMAKFGEVI
DEIGIDVGLDQNQKIWMYEVNWRPGCPPAFYLELDVVIHSIRYAMYLAKNQKPLKKKIVQ
QKTKQVEAKKTLPIIAITGSAGKTTTKAFVGSILSKKWNVFESKDYWNTTEHTKKHKEEI
NDTHQAVVLEYGMAYPGIITNHCSIIQPNISIVTNIGLAHVGNFDGDVRGVAKAKSELIH
GMDQQGLLIVNQDDDNSRYLETQQFKGKIITVGIKKEADYRAYDLQYKDVGMSFKMKLHG
QEIELYIPILGEHHVYNALNAVAVADLLGFSPLDIQAGLNFKKPPRRLTIYNCRDDITVI
DDTVHSHPQGVRAALDVLKNIATNRKVAIIGQMRELGVLREEEYRKVGEYVYEIGIDEFI
TYGFRTDEMSNAAIAKGMDPSRVHHFINKDQLHALLEKLIKPHDTILVKGASKTNMFETV
KFLDQTFKEE
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggaagtttagctatgacgattattggtatgctgcatcatcgacttgatccaaca
acagtgctcaagtcctatgcctttgcagcagttgcgaaagctgaaggcgcaacatttttt
tacttcacacctaaaagtgtggactttgccaaacgttctattcgagcaaaggtctatgag
aatggacaatggcaagagaaaacaatgccctttcctgatgttatctataatgcaggaagc
cctgagaaattatctgtctcgaaggagattattgaccgtttaaaagaggagattccattc
acaacccattcaatcgggaacaaatggaatgtgatgaaacgattaaaggaagcgaaggaa
tttgaacagtatttgattccctctgaaattgtaaaggatgccgatttatttcataagttc
gttaattattataaacgagttgtgtttaagccaattgatggacgaaaagggaagggtatt
tattttataacgaaggcgggagccaaatattttgaggtgcgaaaggatagcaccacgaca
acctatacaaagccacaattggatgcattgataaaggagcaacttgcgtctggcaccttt
attatgcagccgtatattcaatctgttacaaaatctggtcaggtctatgatttccgcctg
catgttcaaaaaaatggagaaggtaaatgggtagtgacaacggtgtatccacgcattgca
ccgaatggctccatcataccgaatattaataatggtggctataccaattatttagatcct
tttttggagcaggagtttaaggatgaggcctataatattcggcgaatgcttgagcatttt
tcactggcgctggcacatcatctggatgaaattcaaatggcgaaatttggggaagttatt
gatgaaattggcattgatgtagggttagatcaaaatcaaaaaatttggatgtatgaggtc
aattggcgcccaggctgtcctcctgccttttacttggaattagatgtggtcatccattcc
atccgttatgcgatgtatcttgccaaaaatcaaaaaccgctgaaaaagaaaattgtccaa
caaaaaacgaagcaggtggaggcaaagaaaaccctacctattattgcgattacaggaagt
gcagggaaaaccacaacaaaggcatttgtgggttcgatcttatcgaaaaagtggaatgta
tttgaatcaaaggattattggaatacgacggagcatacgaaaaagcataaggaagaaatc
aatgatacacatcaggccgttgtattagagtatggtatggcttacccaggcattattacc
aatcactgtagcatcatccagccgaatattagtattgtaacgaatataggcttagcccat
gttgggaactttgatggagatgtaaggggtgttgccaaggcaaaatcggaattgattcac
ggcatggatcaacagggattactcattgtcaatcaagatgatgacaattcaagatactta
gagacacagcaatttaaagggaaaatcatcacggtaggcattaaaaaagaagcggattac
cgtgcatatgatttgcaatataaagatgtcggcatgtcctttaaaatgaagctgcatggg
caagaaatagaattatatattcctattttaggagaacatcatgtatacaacgcattgaat
gcagtggcagtggctgatcttttaggatttagtccacttgatattcaggcagggctcaac
tttaaaaaaccaccaagacgtttaacgatttataattgccgtgatgatataacggttatt
gatgatacagtacactctcatccgcagggggttcgtgctgcgctcgatgtactgaagaat
atcgcgacaaatcgcaaggtagccattattgggcaaatgcgagaacttggtgtcttgagg
gaagaggaatatcgtaaggttggagagtacgtgtatgagataggcatcgatgaatttatt
acctatggctttaggacagatgaaatgagtaatgctgccatcgcgaagggcatggaccca
tccagagtacatcattttattaataaagatcaattgcatgccctccttgaaaagctcatt
aagccccatgataccattcttgtgaagggtgcaagtaaaaccaatatgtttgaaaccgtg
aagtttttagatcaaacgtttaaagaagaataa
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