Lysinibacillus sp. YS11: LBYS11_11235
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Entry
LBYS11_11235 CDS
T05299
Symbol
lsa
Name
(GenBank) Lsa family ABC-F type ribosomal protection protein
KO
K19350
lincosamide and streptogramin A transport system ATP-binding/permease protein
Organism
lys
Lysinibacillus sp. YS11
Pathway
lys02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lys00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LBYS11_11235 (lsa)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lys02000
]
LBYS11_11235 (lsa)
01504 Antimicrobial resistance genes [BR:
lys01504
]
LBYS11_11235 (lsa)
Transporters [BR:
lys02000
]
ABC transporters, eukaryotic type
Other subfamilies
Macrolide exporter
LBYS11_11235 (lsa)
Antimicrobial resistance genes [BR:
lys01504
]
Gene variants
Macrolide resistance genes
Transporters
LBYS11_11235 (lsa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA_29
RsgA_GTPase
AAA_15
KAP_NTPase
Dynamin_N
ABC_tran_Xtn
Motif
Other DBs
NCBI-ProteinID:
AUS86874
LinkDB
All DBs
Position
complement(2280328..2281809)
Genome browser
AA seq
493 aa
AA seq
DB search
MSMIQVQNLTFSYPSSFDNIFENVNFQIDTDWKLGFIGRNGRGKTTFFQLLLGNYEYSGK
IISSVDFTYFPYPVSDPNKYTHEIFEEICPQAEDWECLREIAYLHVDAEVMYRPFKTLSN
GEQTKVLLAALFLTEGQFLLIDEPTNHLDTDARKTVSDYLRRKKGFILISHDRSFLDGCV
DHILSINRANIDVQSGNYSSWKLNFDRQQEHEEVTNQRLQKDIDRLKQSSKRSSGWSNQV
EASKNGTTNSGSKLDKGFVGHKAAKMMKRAKNLESRQQRAIEEKSKLLKNVEKTESLKVE
PLAYPSKEMVVVTDVSIRYDDHIVNKPISFKVAQGDRVVLDGKNGSGKSSMLKLILGKPI
QHTGSIKLASGLVISYVQQDTSHLKGLLSEFIEEHGIDETLFKSILRKMDFERIQFEKDI
SHYSGGQKKKLLIAKSLCEKAHLYIWDEPLNFIDIYSRMQIEELIKSSHLTMVIVEHDQA
FQQTVATKTIAMS
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgatacaagtacaaaacctaactttttcttatccaagcagctttgacaatatt
tttgagaatgtcaactttcaaatcgatacggattggaaacttggatttatcggtagaaac
ggacgaggtaaaacaacattctttcagttgttattaggaaattatgagtatagcggaaaa
atcatctcttctgtagacttcacttatttcccctatccagtttctgatccaaataaatat
acccatgaaatatttgaggaaatttgtcctcaggcagaagattgggaatgtctacgtgaa
atagcttacctacatgtagatgcggaggtcatgtatcgtccttttaaaacattatccaat
ggcgaacaaacaaaggtgctgcttgctgcgttgtttttgacagagggtcaatttttatta
attgatgaaccaaccaatcacctagacacggatgcaagaaagacggtttccgattatctt
cgcaggaaaaaaggatttattttaatttcacatgacagaagctttttagatggctgtgtt
gaccatatcctatcgattaatagagccaatattgacgttcaaagtggaaattattcttct
tggaagttaaattttgatcgtcagcaggaacacgaagaagtaaccaatcaacgactgcaa
aaagatatcgaccgattaaaacaatcctcaaagcgttcgtcaggttggtctaatcaagtg
gaagcctccaaaaacggcacaaccaattcaggttccaaactggacaaaggctttgttgga
cataaagcagccaagatgatgaaacgagcgaagaacctggaatccagacaacaaagagct
attgaggaaaaatcaaaactactaaaaaatgttgaaaaaaccgagtcattgaaagtagag
ccattggcatatccatcaaaagaaatggttgttgtcacggatgtatcgattcggtacgat
gaccatatcgtgaataagcctattagcttcaaagtggcacaaggggatcgagttgtttta
gatggcaaaaatggaagcggaaaaagtagtatgttaaaacttattctaggtaagcccatc
caacatacaggctcgataaagttagcttcaggtctagtcatttcctatgttcagcaggat
acatcccatttaaagggattgctctcggaatttattgaagagcatggtattgatgagacg
ttatttaaatcaatcctgcgcaagatggattttgagcgtattcaatttgagaaggatatc
tctcattattctggtgggcaaaagaaaaagctgctgattgctaaaagcttgtgtgagaag
gctcatttatatatttgggatgaaccactcaattttattgatatctattcacgcatgcag
attgaagagctcataaaaagctctcatctcacaatggtgattgttgagcatgatcaggca
tttcaacaaactgtagcaacgaaaacgatagcgatgtcataa
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