Lysinibacillus sp. YS11: LBYS11_12520
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Entry
LBYS11_12520 CDS
T05299
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
lys
Lysinibacillus sp. YS11
Pathway
lys03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
lys00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
LBYS11_12520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lys03400
]
LBYS11_12520
DNA repair and recombination proteins [BR:
lys03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
LBYS11_12520
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
NNH2
CDC24_OB3
Motif
Other DBs
NCBI-ProteinID:
AUS87102
LinkDB
All DBs
Position
2521906..2522727
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AA seq
273 aa
AA seq
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MHTVWKGSISFGLVNIPVKLHAATENKDVKLRQLHKDCHTPISYKKVCEGCNQEVTDEDI
VKAYEYAKNKFVVLDQEDLENLRKENEDKAVEIIDFVQLTEIDPIYFERTYFLSPDSTGA
KAYSLLRKTLEQSGKIGIAKIVIRSKEQLAIVRVYQNALVMETIHYPDEVRSIGDVPNIP
SEQDVVQKELDTALMLVEQLTTTFNPEKYTDDYRNALLELIEEKKATNTISTSDKQRPIP
ENVTDLMTALQASLEKTKKPATRKRTTRTKKNA
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgcatacagtgtggaaaggcagtatttcctttggacttgttaatattcctgtgaaacta
catgctgcaactgaaaataaagatgtcaaattgcgtcagcttcacaaagactgccatacg
ccgattagctataaaaaggtttgtgagggctgtaaccaagaggtaacagatgaggatatc
gtgaaggcttatgaatatgccaaaaataaatttgttgtgttggatcaagaggatttagaa
aacttgcgtaaggaaaatgaagataaggctgtggaaattattgattttgtgcaattaact
gaaatcgatcccatctattttgaacgcacctattttttatcacccgattcgacgggagcc
aaagcctattcattgttacgaaaaacattagaacaatcagggaaaattggcattgccaaa
atcgttatccgctctaaagagcagcttgccattgtgcgtgtttatcaaaatgcccttgtg
atggaaacaattcactatccagatgaggtaagaagcattggcgatgtccctaatattcca
agtgaacaggatgtagtacaaaaggagctcgatacagccctcatgttagtggaacaacta
acaactacattcaaccctgaaaaatatacagatgattaccgcaatgctttattagaacta
attgaagaaaagaaagctacaaatacgatatctacaagcgataaacaacgtccaattcct
gaaaatgtcacggatttaatgacagctctacaggcctctttagaaaaaacaaaaaagccc
gctacaagaaaacggactacacgtacaaagaaaaatgcttaa
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