Lysinibacillus sp. YS11: LBYS11_13800
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Entry
LBYS11_13800 CDS
T05299
Symbol
rnz
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
lys
Lysinibacillus sp. YS11
Brite
KEGG Orthology (KO) [BR:
lys00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lys03016
]
LBYS11_13800 (rnz)
Enzymes [BR:
lys01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
LBYS11_13800 (rnz)
Transfer RNA biogenesis [BR:
lys03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
LBYS11_13800 (rnz)
Prokaryotic type
LBYS11_13800 (rnz)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B
Lactamase_B_4
PDEase_II
Motif
Other DBs
NCBI-ProteinID:
AUS87339
LinkDB
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Position
complement(2774808..2775740)
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AA seq
310 aa
AA seq
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MQLHFLGTGAGMPSKERNTSALMVKLLDEVSEMWLFDCGEATQHQILHTSLKPRKVTKIF
ITHLHGDHIFGLPGFLSSRSFQGGDEPLTIFGPPGLQQWIEQTLALSKTHLTYPLRFVEV
QEGIIFEDAHFTIHAKELRHVVPCYGYRIEQKDLPGELLIDKAQALGVPKGPLLGQLKNG
HDIVLENGDVVLAKDVVAPAKKGFTLSVLGDTKYCEEAIQLSMGADIIVHEATFDGTTTD
LAASYGHATNVEAAKVAQQAGAHYLLLNHLSARFLPYDLPQFLAEAQGIFPNTFLTADQA
VYTWQHNKLF
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
ttgcagctacattttctagggacaggcgcaggcatgccttcaaaagaacgaaatacaagt
gctctgatggtaaagctattagacgaagtgagtgaaatgtggctatttgactgtggggag
gcgacacagcatcaaatccttcatacgtcgttaaagccacggaaagtgacgaaaatattt
attacacatttacatggggatcatatttttggacttccaggctttttaagctcgcgttcc
tttcaaggtggggatgagccgctaacgatcttcggaccacctggcttacaacagtggatt
gaacaaacattggccctatcaaaaacccatttaacatatcctttacgctttgtagaagta
caagaaggcattatttttgaggatgctcattttacaattcatgctaaggaattacgccat
gttgtaccttgctatgggtatcgtatcgaacaaaaggatttaccaggcgaattattaatc
gacaaagcacaggcacttggtgttccaaagggacctttactaggtcaattaaaaaatggc
cacgatattgtacttgaaaatggtgatgtggtacttgcgaaagacgtggtggcaccagcc
aaaaagggctttacattgtcagtcttaggcgacacgaaatattgtgaagaagcaatccaa
ttatcaatgggtgctgatatcattgtccatgaagcaacttttgatggtacaacaacagat
ttagcagcaagctacggtcatgcaacaaatgtggaggcagcaaaagtcgcacagcaagct
ggagcacactatttattattaaatcatttaagcgcacgttttcttccatatgacttacct
caatttttagctgaagcacaggggatttttccgaatacattcctaacagctgatcaagcc
gtatatacatggcaacataataaattattttga
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