Lysinibacillus sp. YS11: LBYS11_14130
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Entry
LBYS11_14130 CDS
T05299
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
lys
Lysinibacillus sp. YS11
Pathway
lys00010
Glycolysis / Gluconeogenesis
lys00020
Citrate cycle (TCA cycle)
lys00260
Glycine, serine and threonine metabolism
lys00280
Valine, leucine and isoleucine degradation
lys00310
Lysine degradation
lys00380
Tryptophan metabolism
lys00620
Pyruvate metabolism
lys00630
Glyoxylate and dicarboxylate metabolism
lys00640
Propanoate metabolism
lys00670
One carbon pool by folate
lys00785
Lipoic acid metabolism
lys01100
Metabolic pathways
lys01110
Biosynthesis of secondary metabolites
lys01120
Microbial metabolism in diverse environments
lys01200
Carbon metabolism
lys01210
2-Oxocarboxylic acid metabolism
lys01240
Biosynthesis of cofactors
Module
lys_M00009
Citrate cycle (TCA cycle, Krebs cycle)
lys_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
lys_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
lys_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
lys00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
LBYS11_14130 (lpdA)
00020 Citrate cycle (TCA cycle)
LBYS11_14130 (lpdA)
00620 Pyruvate metabolism
LBYS11_14130 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
LBYS11_14130 (lpdA)
00640 Propanoate metabolism
LBYS11_14130 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LBYS11_14130 (lpdA)
00280 Valine, leucine and isoleucine degradation
LBYS11_14130 (lpdA)
00310 Lysine degradation
LBYS11_14130 (lpdA)
00380 Tryptophan metabolism
LBYS11_14130 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
LBYS11_14130 (lpdA)
00670 One carbon pool by folate
LBYS11_14130 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lys04147
]
LBYS11_14130 (lpdA)
Enzymes [BR:
lys01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
LBYS11_14130 (lpdA)
Exosome [BR:
lys04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
LBYS11_14130 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
GIDA
FAD_oxidored
Pyr_redox_3
FAD_binding_3
DAO
FAD_binding_2
AlaDh_PNT_C
HI0933_like
NAD_binding_8
3HCDH_N
Thi4
NAD_binding_7
2-Hacid_dh_C
Lys_Orn_oxgnase
Trp_halogenase
Motif
Other DBs
NCBI-ProteinID:
AUS87404
LinkDB
All DBs
Position
complement(2848775..2850202)
Genome browser
AA seq
475 aa
AA seq
DB search
MAQNYDVVILGGGTGGYVAAIRAAQLGLKTAIVERERLGGTCLHKGCIPSKALLRSAEVY
RMANKTASEYGVDIEGVTLQFDKVQARKQAIVEQLSQGVNTLMKKGKIDVYHGTGRILGP
SIFSPMPGTISVEMSNGDENEMLVPTNVVIATGSKPRGMAGLSIDGQYVLNSDHALQLES
LPKSLLIVGGGVIGIEWASMLCDFGVYVTVVEYGPSILPAEDADIVKEVTKQLEKRGVRI
VTNARLDTNTFKIENDNVFISAQVNEKEEVFEADKLLLCVGREANTQGIGLENTEIEVEN
GFIKVNGSYQTKESHMYAIGDVIGGLQLAHVASHEGLSAIEHIATGKTETLDALKVPKCV
YSYPEVASIGLTESAAKEQGFSLKIGKFPFKAIGKALVNGETEGFVKIIADEETDDILGI
HMVGPHVTDLIGEASLAKVLDATPWEISQAIHPHPSLNEVLVESALAVDDRAIHF
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggctcaaaattatgatgttgtcattttaggtggaggtacaggtggatatgttgcagcc
atccgagctgctcagctaggcttaaaaacagccattgtagagcgtgagcgtttaggaggt
acatgcttgcataaaggctgtattccaagtaaagcgttactccgaagtgccgaagtatat
cgtatggctaataaaacagctagcgaatatggtgtcgatattgaaggtgtaacattacaa
tttgacaaagttcaagctaggaaacaagcaatcgttgagcaattaagccaaggtgtgaat
acactgatgaaaaaaggcaaaatagatgtttatcatggtacagggcgaattttgggtcca
tctattttctcacctatgcctggtacaatatctgtagaaatgtccaatggcgatgaaaat
gaaatgcttgtgcctacgaatgttgtcattgcaacgggctcaaagcctcgtggtatggca
gggttatcgatagatgggcaatatgtgctgaattcagaccacgcattacagttagaaagt
ttaccaaagtcactgctaatcgttggtggtggtgttattggaattgagtgggcatctatg
ctatgcgattttggtgtatatgtaacagtagtagaatatggtccatccattttaccagct
gaagatgcggacatcgttaaagaagtgacgaaacaacttgagaaacgaggcgttcgtatt
gttacgaatgctcgcttagatacaaatacattcaaaattgaaaatgataacgttttcatt
tctgcgcaagtgaatgaaaaagaagaagtttttgaggctgataaactattactttgtgta
ggacgtgaggcgaatacgcaaggtattggtctagaaaatacagagattgaagtggaaaat
ggctttattaaagtgaatggttcctatcaaacgaaagagtctcatatgtatgccatagga
gatgtgattggtggcttacaattagcgcatgttgcttctcatgaagggctttcagctatt
gagcatatagcaacagggaaaaccgagacattggatgcactaaaagtaccgaaatgtgtt
tattcctatccagaggttgctagcattggattaacagaaagtgctgctaaagaacaagga
ttttcattaaagattggtaaattcccgtttaaggccattggtaaagcattagtaaatgga
gagacagaaggctttgtcaaaattattgctgatgaagaaacagatgatattttgggtatt
catatggtagggcctcatgtaacagatttaattggtgaagcatccttagcaaaagtgtta
gatgcaacaccatgggaaattagtcaggcaattcatccacatccatccttaaatgaggtg
ttagtggagtctgctctagcagtggatgatcgcgctatccatttttaa
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