Lysinibacillus sp. YS11: LBYS11_14200
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Entry
LBYS11_14200 CDS
T05299
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
lys
Lysinibacillus sp. YS11
Pathway
lys03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lys00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
LBYS11_14200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lys03400
]
LBYS11_14200
Enzymes [BR:
lys01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
LBYS11_14200
DNA repair and recombination proteins [BR:
lys03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
LBYS11_14200
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
AUS87416
LinkDB
All DBs
Position
complement(2863725..2865083)
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AA seq
452 aa
AA seq
DB search
MSSASYLTVKALTKYIKRKFDADPHLREVYVKGELSNVKIHQSGHIYFTLKDDGARIAAT
MFKAAATKLAFEPKEGMQVFIRGDVNVYEGYGTYQLYVQEMQPDGIGSLFVAFNQLKEQL
QKEGLFKPEWKQPIPKFPEKIGVLTSTTGAAIRDICSTLKRRYPLAEILIYPTLVQGAQA
APNIVQNIQRANQEASCDVLIVGRGGGSIEDLWAFNEEIVARAIFESRIPIISAVGHETD
TTIADYVADLRAPTPTAAAELAVPDQADLYQRVLTQKSQLHQMVRSQLMAERQRLNKLQQ
SYPLSMPERLYRPFTERLAQLESGLQAAMQVSLMKKAAQLQQLHSTVEQHSPKKALAFHQ
RELEARVQQLSRATTYYVAKKQQQFESTVRTLEALNPLSILTRGFTVAYKDQQMIKSSTE
VQKQDKLTLTFHDGKVVANVTNILPKNEGELL
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgtcctctgcttcttatttaacagtaaaagcgttaacaaaatatattaaacgaaaattc
gatgcagatccacatttgcgtgaagtgtatgtaaaaggtgaattatcaaatgtgaaaatt
catcaatccggccatatttactttacattaaaggatgatggtgcccgaatagctgcgacg
atgtttaaagcagcggctaccaaattagcgtttgaaccaaaggaaggtatgcaagtattt
atccgaggggatgtaaacgtttacgaaggctatggaacctatcagctatatgtacaggaa
atgcaaccagatggcattggtagcttatttgttgccttcaatcaattaaaagagcaatta
caaaaagaaggtctttttaaacctgagtggaagcaaccgataccaaaatttcctgaaaaa
attggtgtgctcacgtcaacaactggtgcagctatacgggatatttgttcaacattaaag
aggcgttacccacttgctgaaattttgatttatccaacccttgtacaaggagctcaggct
gcaccgaatattgtgcaaaatattcaacgtgctaatcaagaggcaagctgtgatgtgttg
attgtcgggcgaggaggaggctccatcgaggatttatgggcttttaatgaagaaattgtg
gcaagagctatttttgaaagccgaatacctattataagtgcggttggccatgaaacagat
acaacgattgccgattatgtagccgatttacgtgcacctactccaacagctgctgctgag
ttggctgtgcccgatcaagcggatctctaccaacgcgtgcttacgcagaaatcacagcta
catcaaatggttaggtcgcaacttatggcagagcgacaacgtctaaataagctccagcag
tcttatccattgtcaatgccagaaagactttatcgaccttttacagaaagattggcacag
cttgagtcaggattacaggcagcaatgcaagtgagcttgatgaaaaaagctgcacaactt
caacaattacatagtacggtggagcaacattcacccaaaaaggcacttgcttttcatcag
agagagcttgaagcgcgcgttcaacaattatcacgtgctacaacgtattatgtggcaaaa
aagcaacaacaatttgagtcaaccgttagaacattagaagctttaaatccactgtccatt
ctaacaagaggatttacagtagcatataaagatcagcaaatgatcaaatcatccactgag
gtgcaaaagcaagataaactgacactgactttccatgatggaaaggttgtggctaatgtg
acgaatatcttgccaaagaatgagggggaattgttgtga
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