Lysinibacillus sp. YS11: LBYS11_14760
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Entry
LBYS11_14760 CDS
T05299
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
lys
Lysinibacillus sp. YS11
Brite
KEGG Orthology (KO) [BR:
lys00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lys03019
]
LBYS11_14760
03009 Ribosome biogenesis [BR:
lys03009
]
LBYS11_14760
Enzymes [BR:
lys01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LBYS11_14760
Messenger RNA biogenesis [BR:
lys03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LBYS11_14760
Ribosome biogenesis [BR:
lys03009
]
Prokaryotic type
rRNA helicases
LBYS11_14760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Flavi_DEAD
Helicase_RecD
DUF7117
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AUS87514
LinkDB
All DBs
Position
complement(2968376..2969677)
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AA seq
433 aa
AA seq
DB search
MSKYTDYNFQPFLQDAIANLGFTEPTPIQKEIIPLLLKGKSAIGQAHTGTGKTHSFLIPI
VQRIDVEKQEVQAVITSPTRELAQQIFDALNQLIEGTAIQAKLFIGGTDKQRSIDKLKTQ
PQIVVGTPGRIRDLVSAQALFVHTAPILVVDEADLAFDMGFIEEIDGFASQMPEKLEMYV
FSATIPEKLQPFLKKYMEAPVHVHMNDKRPVAEGIDFVLVPVRSKSRNKRLLEVIEGINP
FLAVIFTNTRKTAEHVAGYLNEHGIRCGQIHGDLSPRDRKKMMKQIRDLDYQYIVATDLA
ARGIDIQGISHVINYEIPEDLEFFIHRVGRTARAGNKGTAITLFEPSDEDAVVRVEKMGI
PFVQKDVKDGEWSELKERHARKNRVKQENEIDVKAKALVRKPKKVKPGYKRNMKWEMEKI
KKRERRLKARGKK
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaatatactgattataattttcagccatttttgcaggacgccattgcaaatctt
ggctttacagaaccgacaccaattcaaaaagaaattattccgcttttattaaaagggaaa
agtgctattggacaggcacatacaggaacagggaaaacacatagttttttaattccaatt
gttcaacgtattgatgtagaaaaacaggaagtacaggccgttattacttctcctacacga
gagttagcacagcaaatttttgatgcattaaatcaattaatagaaggaacagctattcaa
gcaaaactatttattgggggtacggacaaacaacgctccattgataaattaaaaacacag
ccacaaattgttgttggaacaccaggacgtattcgtgaccttgtttcagcacaagcgtta
tttgtgcatacagcaccaattttagttgtcgatgaagcggatctagcttttgatatgggc
ttcattgaagagattgatggctttgcttcacagatgcccgaaaagcttgaaatgtatgtt
ttctctgcaacaataccagaaaaacttcagccatttttaaagaaatatatggaagcgcca
gtgcatgtccatatgaatgataaacgaccagtggcagaaggtatcgattttgtacttgta
ccagtgcgctcaaaatcgcgtaataaacgtttattagaagtcattgagggcattaatccc
tttttagctgttatctttaccaacacacgtaagacagcagaacacgttgctggctattta
aatgagcatggtatccgttgtggccaaattcacggtgatttaagtccacgtgatcgtaaa
aaaatgatgaagcaaatccgtgatcttgactaccaatacattgtagcaactgacttagct
gctcgtggtattgatatccaaggcatttctcatgttattaactacgagattccagaagac
ttagaattctttattcaccgcgttggtcgaacagcgcgtgcaggcaataaagggacagcc
attactttatttgagccatcagatgaggatgcagtagttcgcgtagaaaaaatgggcatt
ccttttgtacaaaaagatgtaaaagatggcgaatggtcagagttaaaagagcgtcatgcc
cgtaaaaatcgtgtgaagcaagagaatgaaattgatgtgaaagcaaaagcgttggtacgt
aagcctaaaaaggtaaaacctggctataaacgtaatatgaaatgggaaatggaaaaaatt
aaaaaacgtgaacgtcgcttaaaggcacgcggtaaaaaataa
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