Lysinibacillus sp. YS11: LBYS11_17505
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Entry
LBYS11_17505 CDS
T05299
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
lys
Lysinibacillus sp. YS11
Pathway
lys00300
Lysine biosynthesis
lys01100
Metabolic pathways
lys01120
Microbial metabolism in diverse environments
lys01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
lys00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LBYS11_17505
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lys01002
]
LBYS11_17505
Enzymes [BR:
lys01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
LBYS11_17505
Peptidases and inhibitors [BR:
lys01002
]
Metallo peptidases
Family M20
LBYS11_17505
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
AUS88030
LinkDB
All DBs
Position
complement(3514927..3516195)
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AA seq
422 aa
AA seq
DB search
MNDLQALKAQLVEAVENHQDELIAFCSKLIQIPSVNPPGDTTEITAFIENYLNDVDISYQ
KYEAADKMFNLVASIGNGEGKELVYCGHTDVVPVGDLSKWDFDPFSGEVKDGWMLGRGAS
DMKAGLAGIIFATKLLKKLNIELPGKLTLAIVPDEETGGEFGVPWLLERGYVQGDGCLIA
EPSSPLNPTIGQKGSYWFELEVRGEPGHGSLSPLAGRNAIVDAIRAIQEIRTLWDVEITI
PEEIQPLIEVSKKYMREVEKDRLKYQEVLEKITVNIGTIEGGTKSNVIPDYCKVQVDCRL
PFGITQEEVTEILTTKLDGLAIDYSIQRFGFKSVANYTPAENPVCQSIVENISYVTGQEA
YGVMQWASSDARHFRQYDIPVLQYGPAYLPSIHGYNEKVRVEDIVRCAKVYITAAVDFLY
QK
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatttacaagcacttaaagctcaattagtagaggcagttgaaaatcatcaagat
gaattgatagcgttttgttcaaagctcattcaaatcccaagtgtcaatcctccaggggat
acgactgaaataacagcttttatcgaaaactatttaaatgatgtagacatttcttatcaa
aaatatgaagctgctgataaaatgtttaatttagtagcttctattggaaatggggaagga
aaagaactcgtttattgtggccataccgatgttgttcctgtcggtgatctatcaaaatgg
gattttgatccattttcaggagaagtgaaggatggctggatgcttggacgtggggcgagt
gatatgaaagccggtttagcaggtattatttttgcaacaaagttattaaagaaactgaac
attgaactaccagggaaattaactttggcgatcgtaccagatgaagaaactggcggtgaa
tttggtgttccttggctgttagagcgaggctatgtgcagggagatggttgtttaatcgct
gagccctcttcacctctaaacccaactattggacaaaaaggatcttactggtttgaatta
gaggtgcgtggggaacctggtcatggaagcctatcaccattggctggacgaaatgccatt
gttgatgcaatccgagctatacaagagattcgtacactatgggatgtagaaatcacaatt
cctgaagagatacagccacttatcgaggtatcaaaaaaatacatgcgtgaagtggagaaa
gatcgcttgaaatatcaagaagttttagagaaaattactgtaaatattggtacaattgag
ggaggtacgaagtcaaacgtaatcccagattactgtaaggtccaggtcgactgtcgttta
ccatttggtattacacaagaagaagtaacagaaatcttgacaactaaactagatggcttg
gctatcgattattcaatccaacgttttggctttaaaagcgtagccaattatacgcctgct
gaaaatcctgtatgccaatcgatagtggaaaatatatcatatgttacagggcaagaggca
tatggtgtcatgcaatgggcaagcagtgacgctcgtcatttcagacaatatgatattcct
gtattgcaatacggcccagcttatttaccaagtattcatggttataatgaaaaagtgcgt
gttgaggatatcgtacgctgtgcaaaagtttatataactgctgctgttgatttcctatat
caaaagtaa
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