Lysinibacillus sp. YS11: LBYS11_19145
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Entry
LBYS11_19145 CDS
T05299
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
lys
Lysinibacillus sp. YS11
Brite
KEGG Orthology (KO) [BR:
lys00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lys03019
]
LBYS11_19145
Messenger RNA biogenesis [BR:
lys03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LBYS11_19145
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Motif
Other DBs
NCBI-ProteinID:
AUS88292
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All DBs
Position
complement(3811288..3812223)
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AA seq
311 aa
AA seq
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MKGITTLQVGEVVDQFLLIKQATKGVTTVGKPFMSLILQDKSGDIEAKLWDTNEDHEKMY
HAEAIVRVGGEIHDYRGKNQLRIKSIRVAKPEEGIAIHDLVPSSATPKEQLYEELTQFFF
DIKNPNISRITRAAIKKHQEAILVFPAATKNHHDYASGLLDHMVSMLKLGKAIADLYPTL
NRDLLYAGIILHDVGKVVELSGPVATMYTVEGNLLGHITIMVNEIAKIASELEIEGEEVM
LLQHMVLSHHGKEEWGSPKKPMIQEAEILHYIDNIDAKMNMLTRALGKTTPGEFTERLFP
LDNRSFYKPTI
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgaaagggattacgacgctccaagttggagaagtagttgatcaatttttattaataaaa
caagcgacaaaaggggttacaaccgttggaaagccatttatgtcgctaatattacaagat
aagagtggggatatagaggcaaagctatgggacacgaatgaggatcatgaaaagatgtac
catgcggaagccattgtacgtgttggcggagagattcatgactatagaggaaagaatcaa
ttgcgtattaaatctatccgtgttgctaagccagaggaaggaattgctattcacgattta
gtgccatcctctgcaacaccaaaagaacaactatatgaagaattaacgcaatttttcttt
gacattaaaaaccctaatatctcacggattacaagagcagcaattaaaaaacatcaagag
gctattttagtttttccagcagcgactaaaaatcatcatgactatgcatcaggtttatta
gatcatatggtctccatgctcaaactaggtaaagccattgctgatctatatccaacatta
aatcgggacttattatatgctggaattattttacatgatgtgggcaaggttgtagagtta
tcaggcccagttgccacaatgtatacagtagaaggcaatttattaggtcatattacgatt
atggtaaatgaaattgctaagattgctagtgagcttgaaattgaaggtgaggaagtcatg
ctgttacagcatatggtattgtctcaccatggaaaagaagagtggggtagcccgaaaaaa
cctatgattcaggaagcagaaattttgcattatatcgataacattgatgcaaagatgaat
atgttaacaagggcattaggtaaaacgacaccgggcgaatttacagagagactcttccca
cttgataatcgttcattctataagcctactatttaa
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