Lysinibacillus sp. YS11: LBYS11_19770
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Entry
LBYS11_19770 CDS
T05299
Name
(GenBank) exonuclease sbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
lys
Lysinibacillus sp. YS11
Brite
KEGG Orthology (KO) [BR:
lys00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lys03400
]
LBYS11_19770
DNA repair and recombination proteins [BR:
lys03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LBYS11_19770
Archaeal homologous recombinant proteins
LBYS11_19770
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
DNA_pol_E_B
Epimerase_2
Motif
Other DBs
NCBI-ProteinID:
AUS88391
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Position
complement(3930110..3931267)
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AA seq
385 aa
AA seq
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MKIFHTADWHLGKLVQGVYMTEDQHYILQQFIQAIDEEKPDVIIIAGDLYDRSMPPIEAV
NLLNDVLAKIVLEKKIPVLAVAGNHDSAGRLNFGSRLMSDSGLYIKGQFTKNHAPIVLND
QHGEVHFHLVPYAEPAAIRNIFEDESIRSHQDAMQKIIEYITKDMDTSKRHVFVGHAFVT
KYGEEKANTSDSERPLSIGGSDCVNAALFKPFHYTALGHLHKAHFVLNETIRYAGSILKY
SLSEHLHEKGFLIIELDEQGNTTVSKRKLVPRRDLRVVEGQLEELLTLTPSEDYVFVRLT
DKISVTSPMERIRSVFPHAMHVERKVLRQDMPRELQVVEAEKLEDIDLFRSFFTNIIGIQ
PDEDTERLFTEMLQELLDEERETVK
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatatttcatacagcagattggcatttaggaaagcttgttcaaggtgtctatatg
acagaagatcaacattatattcttcaacaatttatacaagcgattgatgaggaaaaacca
gatgtaattatcatcgcaggtgatttatatgatcgttcgatgcctcctattgaggcagtt
aatttactaaatgatgtattagcgaaaatagtattagagaagaagattcctgttctagca
gtggcgggaaatcatgatagtgcaggtcgtttaaattttggtagccgtttaatgagtgat
agtggtttatatattaagggccaatttacaaaaaatcatgcccctattgttttgaatgat
caacatggggaagtacattttcacctagtgccctatgcagagccagctgctattcgcaac
atctttgaagatgaatcaatccgttctcatcaagacgccatgcaaaaaattattgagtat
atcacgaaagacatggacacaagtaagcgtcatgtttttgttggacatgcctttgtgacg
aagtatggtgaggagaaagcaaatactagtgattccgagcgacccctttccattggaggc
tcagattgtgtgaatgcagctttattcaaaccttttcactatacggcgcttgggcactta
cataaggcacattttgttttaaacgaaaccatacgctatgcaggctctatcttaaagtac
tcgttatctgagcatttacatgagaaaggatttttaatcatcgaattagatgagcaaggt
aacaccacagtaagtaaaagaaagcttgtgccaagaagagatctacgagtagtagaaggg
caattagaggagttattaacgctcacaccaagtgaggattatgtatttgttagattgacg
gataaaatatctgtgacttcaccgatggaacgtattcgtagtgtatttccgcacgctatg
catgtggagcggaaggtactaagacaagatatgccacgtgaactacaagtagtagaagct
gaaaaactagaagatattgatttattccgttcattcttcaccaatattattggcattcag
cctgatgaagatacggaacgcctattcacagagatgttacaggagttattagatgaggag
cgagagactgtaaaatga
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