Lysinibacillus sp. YS11: LBYS11_19805
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Entry
LBYS11_19805 CDS
T05299
Name
(GenBank) AMP-dependent synthetase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
lys
Lysinibacillus sp. YS11
Pathway
lys00061
Fatty acid biosynthesis
lys00071
Fatty acid degradation
lys01100
Metabolic pathways
lys01212
Fatty acid metabolism
lys02024
Quorum sensing
lys04146
Peroxisome
Module
lys_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
lys00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
LBYS11_19805
00071 Fatty acid degradation
LBYS11_19805
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
LBYS11_19805
09145 Cellular community - prokaryotes
02024 Quorum sensing
LBYS11_19805
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
lys01004
]
LBYS11_19805
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lys04147
]
LBYS11_19805
Enzymes [BR:
lys01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
LBYS11_19805
Lipid biosynthesis proteins [BR:
lys01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
LBYS11_19805
Exosome [BR:
lys04147
]
Exosomal proteins
Exosomal proteins of breast milk
LBYS11_19805
Exosomal proteins of breast cancer cells
LBYS11_19805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
AUS88398
LinkDB
All DBs
Position
complement(3938128..3939624)
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AA seq
498 aa
AA seq
DB search
MTKFMTDILEDYAGQQPNAIATLYDGKAISYHDFYQRVERFATYLQEQDFKKDDVIALYT
LNSDLFLIAYLGVQLAGFIVMPINTKLAAPEVDFIFNHSQARGLIFDERLTEVLEDVSYS
FQHTIGFQEMKNIIEYDNRARKIVQLEADDTAVVMYTSGTTGKPKGVMLTHQNIVATADI
WSSSMNMSSKDKMFICTPLFHCAGLHVFAMPMFYRGGTVVIEEAFSPTKTLAQIVATEAT
IFFGVPSMYTIILNTPGFKEHSFNHLRLLCYGAAPMPYELVKQVKEAFPNVKVQNLYGQT
ENSPAATSLLDTDALTKIGSVGKPLAQTEVCVVNSEGKTVPAGEVGEICVRGPQVMKGYL
RNPEETARAIRDGWLYSGDLGRFDEEGYLYIVDRKKDMIIRGGENIYPIEIEEVLYQMPE
ILEAAVVGLPHEVYGEVPKAFVVLKEGKSLDENSILSYCQTRLAKYKVPYEIEFLIELPR
NASGKVLKHTLRPKVTTI
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagtttatgacagatattcttgaagactatgcagggcagcaaccaaatgcaatt
gcaacattgtatgatggaaaggcaataagctatcatgatttttaccaacgtgtagaaaga
tttgcgacttacttgcaggaacaagattttaaaaaggatgatgtgattgccctatatacg
ctcaattcagatttatttttaatcgcatatttaggtgtccaattagctggatttattgtg
atgccaattaacactaaattagctgctcctgaggttgattttatttttaatcattcacaa
gcaaggggcttaatttttgatgaaagattaacagaggtattagaggacgtttcttattca
ttccaacatacaatcggatttcaagaaatgaaaaacataattgaatatgataatcgtgct
agaaaaattgtgcaattagaggctgacgatacagcagtggtcatgtatacgtcgggaaca
acaggtaaacccaaaggcgtcatgctaacgcatcagaatatcgtggctacagcagatatt
tggtcttcttctatgaatatgtctagcaaggacaaaatgtttatttgtacgcctttgttt
cattgtgcaggtcttcatgtatttgctatgcctatgttttatagagggggaacagtggtc
attgaagaagcattttcaccaactaaaacgttagctcaaattgtagctactgaggcgaca
attttctttggtgttccatctatgtataccattatattaaatactcctggattcaaggaa
catagctttaatcatttacgtttattatgttacggtgctgccccgatgccttatgagctt
gtaaagcaagtgaaagaagcatttccaaatgtaaaggttcaaaatctttatggtcaaact
gaaaattcacctgcagctacctctttattagatacggatgcattgacgaaaattggctca
gttggaaaaccattagcacagacagaggtttgcgtagttaatagtgaaggaaagaccgta
ccagctggagaggtgggcgaaatatgcgtaagaggaccacaagtaatgaagggctattta
cgcaatccagaggaaacagcaagagcgattagggatggctggttgtactcaggcgattta
ggacgctttgatgaggaaggctatttatatattgtagatcgaaaaaaagatatgattatt
cgtggtggagaaaatatttacccaatcgaaatagaagaagttctatatcaaatgccggaa
attttagaagcagcagtggttggattgccacatgaagtatatggagaagtaccaaaagca
tttgttgtgttaaaggaagggaagtctcttgatgaaaattcgatactatcctattgtcaa
acacgacttgccaaatacaaagtaccttatgaaattgaatttttaatagaattgccacga
aatgcctctgggaaggtactaaagcatacattacggccgaaagtgacaacaatttaa
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